Thermomicrobium roseum: trd_0141
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Entry
trd_0141 CDS
T00845
Name
(GenBank) putative cable pili-associated 22 kDa adhesin protein
Organism
tro
Thermomicrobium roseum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
RGI_lyase
Polysacc_lyase
fn3
Big_7
Metallophos
Motif
Other DBs
NCBI-ProteinID:
ACM05861
UniProt:
B9KXF4
LinkDB
All DBs
Position
complement(148057..152910)
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AA seq
1617 aa
AA seq
DB search
MNDGREQSLHIRSMRRVRRLPPLLLACALVTGLFGARPQPAAAASCATSGPSTGTYLVTV
CLTQPVSGAFVSGDITVTASVTTSGAAPRVQRLIYSLDGTYLLTEFFSPYTFRLPTRQWA
DGQHTLSASALMSDGFTSAPTSITLFLQNGMSSPPPIPTGFQPTSGTTPPAGQPFRVVAV
GDGGDDGTYSAQVAQLIGTQSPNLFLYLGDLYEKGSYTEFVNYYGLNGQLFSAYRSITNP
IVGNHEYEGRVAEGYVRYWQSPPDFYSLDAGGWHIIALNSNSQFGQYGPGTPQYEWLLRD
LQAHRDACTIAFFHHPRFSIGPQGDTPALQPIWELLFQFGVELVLVGHDHDYQRWMPLDR
DGQPHPNGIVQLVIGTGGHGIRAFARSDSRVAAGFDQPPSAYGVLTASLFSDRADLAFVD
LAGQVRDSTTVACHGPNDTMAPSAPTGLRATLVSSQQVALSWDAATDDYAVTSYEILRDG
VVIGIVPGTTRTFLDNTPQPDQTYSYQVVALDAVGNRSTASAPVTISTRTTLFADDFESG
TLSRWSAVSGLTITTLQPHTGQYAARALSTRGTVAYARTLLPSAQTDVTVETWFYLAARG
TNDQVTLVRLLKPTGGGLGFVQIAADGLLAFRNEVTGTTITTTASVSMNAWHQLRLRLVT
GSGGRVELWYDSNQLISSAQSFGSSSVGQIQIGEHKTKRTFDVRFDDVLVTPPAAPPPDT
TPPDTTLTSTPPLSTAETTATFSFTASEPATFQCSLDGADWQTCSSPVTFSNLATGPHTF
SVFAVDRAGNADPTPASFAWEITAPIAPETTLLTTPPALTNQTTATFTFSSSDTAASFEC
QLDATPAVPCASPWTLSDLTEGLHTFSVRAIDGEGVPDPTPASWSWTIDTTAPPAPGSVT
ASALSSTQVSLSWTSVTDASGIAGYDVYRDGTLLVQLGPVTSVTDSTVQPATTYQYTIRA
RDNAGNVSSDSVPATVTTPSLRLFEDDFESGSLVRWSSVSGLTITTDAPYSGTYAAQALS
TSGTPAYALGNLARPVSEFSYRIRFQLVSQGNNPVYLVKWRRGTTSLGGVYLTSTGRLGI
RNDIAGQALSTTTLVTTGAWHTLETHVRTGPDGFVEVWYDGIRIHQSFQNFGANQATAIQ
LGENSTGRIFDVRFDEVVADTAAIDAPPDSTPPETTITSAPPSTTDQTSATFSFTANELA
TFRCSLDGAPAQPCTSPVTYTGLAVGTHTFSVTATDLAGNTDPTPATFNWEVTATSTAPE
TVLTETPPLLTNSTQASFAFHSDDPSATFQCQLDGAAPAPCTSPLTLTNLSEGAHTFTVT
AVNASGNVDPTPASWAWTIDVTPPPAPTGVGATPGNGQVTITWQRVSDANGIASYEIYRD
GTLLTSVGDTTSYVDSSVQPNTTYSYTVAARDRAGNASAQSDPVSVTTGRFVLFADDFES
GTLNAWTTVSGLTLTTTDPYAGTYAAQALSTSGTPAYAITALPNSASDLHVRVRFFVATQ
GANTVYLLKLRTPTGTSLGGVFISSTGKLGFRNDIAGQSTTTTVAVSPGTWHTLLLHVVV
STSGTVELWYDGMQIASISGNLGTDPIGGFQLGENRTGRTFDVRFDDVLLDTQPIAG
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatggccgcgagcagtcgctccatatccgttcgatgcgacgagtccgtcgcctc
ccgcctcttctcctcgcttgcgcgctcgtcactggtctgttcggagcacgaccacagcct
gcggcagcagcgagctgcgcgacgagtggcccttccaccggcacgtacctcgtcacggtc
tgtctgactcaaccggtgagcggcgcgttcgtttccggcgacatcacggtcaccgccagc
gtgacgaccagtggggcagcacctcgcgtgcaacgcctgatctactcgttggatggcacg
tatctgctcaccgagttcttctctccctataccttccgtcttccgacccggcagtgggcg
gacggccagcataccctctccgcttccgcactgatgagcgacggcttcaccagcgcaccg
acgagtatcacgctgttcttgcaaaacggcatgagcagtccgccacccatccctactggc
ttccaaccgacgagcgggacgactccgcccgctgggcaacccttccgcgtcgtcgccgtc
ggggatgggggtgacgacggaacgtactcggcgcaagtggcccaactgatcggcacgcaa
tcgcccaatctcttcctgtatctcggcgatctctatgagaaggggagttacaccgagttc
gtcaattactacggcctgaacggacagcttttctcggcctaccgctcgatcaccaacccg
atcgtcggcaatcacgagtacgagggtagagtcgctgaaggctatgtccgctactggcag
tcaccgccggatttttacagcctcgatgcgggaggatggcacatcatcgccctcaactcc
aacagccagttcggccaatacggaccggggacaccgcagtacgaatggctgctccgtgac
ctgcaagcacaccgcgatgcctgtaccatcgccttctttcatcatccgcgtttcagtatc
ggcccacagggagatactcctgctctccaaccgatttgggaactcctctttcagttcggt
gtcgaactcgtgctcgtcgggcacgaccatgactatcagcgctggatgccgctcgaccgg
gacggccaaccgcaccccaacgggatcgtccagctggtgatcggtactggcgggcatggc
atccgtgctttcgcccggagcgactcgcgcgtcgctgcaggattcgatcagccaccctcc
gcgtacggtgtcctaactgcttcgctcttctccgaccgggctgatcttgccttcgtcgat
ctcgctgggcaggtacgcgacagcaccaccgtcgcatgccatggtcccaacgacaccatg
gcgccgagtgcaccgactggccttcgcgcgaccctggtctccagccagcaggtggcgctc
tcctgggacgctgcaacggatgactatgccgtcacatcgtacgagatcctacgcgatggt
gtggtgatcgggatcgttcccggtaccacacgcacgttcttggacaacaccccacaacct
gaccagacgtactcctaccaggttgtcgcgctcgatgcagtcgggaatcgttccacggcg
agcgcaccggtaacgatttcgacgaggaccacgctcttcgccgacgacttcgaaagcggc
acgctcagtcgctggagcgcagtgagtggtctcacgatcacgacgttgcaaccgcatacc
gggcagtatgccgcgcgcgccctctcgacgagagggactgtcgcctatgccagaactctg
ttgccctcggcgcaaacggatgtcacagtcgaaacctggttctatctcgcagcgcgtggc
acgaatgatcaagtcacgctggtacgcctcctcaagccaaccggcggcggtctcggcttc
gttcagatcgctgccgatggccttctcgccttccggaacgaggtgacaggcacgaccatc
accaccaccgcttccgtcagcatgaacgcttggcaccagctgcgtcttcgcctcgtcacc
ggctcgggtggtcgtgtcgaactttggtacgacagcaatcagctcatcagctcggcacag
agcttcggctccagcagtgtcggtcagatccagatcggcgaacataaaaccaagcgtaca
ttcgacgtccgcttcgatgacgtactcgtcacgcctccggctgctccgccaccggacacg
acgccccctgacacgaccttgacgagcacgccaccgctatcgaccgcggagaccacggca
acgttctccttcactgccagcgagccagcaacgttccaatgcagcctggacggtgccgat
tggcaaacctgctcgagccccgtcacgttcagcaacctcgcgactgggccgcacaccttc
agcgtttttgcggtcgatcgagccggcaacgccgatccgacgccggccagcttcgcgtgg
gagatcactgcaccgatcgccccggagacaactctcttgaccactccaccggcactcacc
aatcagaccaccgcgacgttcaccttcagctcgagcgatactgcggccagcttcgagtgc
caactcgatgccacccctgccgtgccctgcgcgagcccgtggacgctcagcgacctcacc
gagggactgcataccttctccgtgcgcgcgatcgacggcgaaggtgttcccgatcccact
ccggcgagttggtcctggaccatcgacacgaccgcgccacccgcgccgggcagcgtcacg
gcgagcgcgctgagcagcacacaggtgagtctctcctggacgagcgtgaccgacgcgagc
gggatcgccggctacgatgtctaccgcgatggtaccctgctcgtgcagctgggacccgtc
acgagcgtcaccgactcgaccgtacagccagcgacgacctaccagtacaccatccgcgcc
cgcgacaacgctggaaacgtctccagcgattcggtgccagcgacggtgacgacgcccagc
ctgcgcctgttcgaggacgacttcgagagcggttcgcttgtgcgctggtccagcgtcagc
ggcctcacgatcacgaccgatgcaccctactcgggcacatatgctgcccaagccctttcc
accagcggcacacccgcctacgcattgggaaatctcgctcgtcctgtcagcgagttttct
taccgcatccgcttccagctcgtcagccaaggaaacaatcctgtctatctggtcaagtgg
cgacgcggcacaacctcgctcggcggcgtctacctgaccagtactggtcgcctcggtatt
cgcaacgacatcgctggacaagcgctgtcgaccacgactctcgtcaccaccggggcgtgg
catacgctcgaaacgcacgtgcgcactggacccgatggtttcgttgaagtttggtacgac
gggatacgcattcaccagagcttccagaacttcggagccaaccaggcgacggctatccag
ctcggcgagaacagcaccggtcgcatcttcgatgtccgcttcgacgaggtcgtcgctgac
acagcagcgatcgatgcgccacccgactcaactccccccgagacgacgatcaccagcgca
cccccgagcacgaccgaccagacctcagcgaccttctcgttcacagcgaacgaactcgcc
accttccgctgcagcctggacggcgctcccgcacaaccctgcacgagcccggtgacttac
acaggattagcggtcggcacgcacaccttcagcgtcaccgcaaccgatctcgctggcaac
accgatcccacaccggcaaccttcaactgggaagtcaccgcgacgtccactgcccccgaa
accgtgctcaccgaaacaccgccgctcctcaccaacagcacccaggcgtccttcgccttc
cattccgacgatccgagcgccaccttccaatgccagctggacggagcggcacccgctccg
tgcacgagcccgctcacgctcaccaacctcagtgaaggtgcgcacaccttcactgttacc
gcagtgaatgcatccggcaatgtcgatcccacaccggcaagctgggcgtggacgatcgac
gtgacgcctcccccagctccgactggcgtcggcgcgacgcccggtaacggacaagtcacg
atcacgtggcaacgcgtgagcgacgcgaatggaatcgccagctacgagatctaccgcgac
ggaacgctactcacctcggtcggcgacaccacgagttacgtcgatagctctgtgcaaccg
aacacgacctattcgtataccgtggctgcgcgcgaccgggccggcaacgcctcagcgcag
agcgatcctgtttcggtaacgaccggtcgcttcgtgctcttcgccgacgatttcgagtcc
ggcaccctgaacgcctggaccaccgtgagcggactcacgctcacgacgaccgatccgtat
gcggggacatatgctgcccaagccctttccaccagcggcacacccgcctacgccatcact
gcgcttccgaactcagcgagcgatctccacgttcgcgtgcgcttcttcgtcgccacgcaa
ggtgccaatacagtctatctcctgaagctgcgcaccccgacaggcacctcgctcggtggc
gtcttcatctcgagtaccggtaagctcggcttccggaacgacattgccgggcagagtacg
acgacgactgtcgctgtctcaccaggtacctggcacacgctgctcctgcacgtcgtcgtg
agtaccagcgggacagtcgaactctggtacgatggcatgcagatcgcttccatcagtggc
aatctcggaacggacccgatcggaggcttccaactgggagagaacaggacaggccgtacc
ttcgatgtccgcttcgacgacgtcctgctcgacacccagccgatcgcaggctga
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