Thermomicrobium roseum: trd_0169
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Entry
trd_0169 CDS
T00845
Name
(GenBank) putative DNA helicase
Organism
tro
Thermomicrobium roseum
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
DSHCT
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
Exonuc_VII_L
AAA_22
Ribonuc_2-5A
Motif
Other DBs
NCBI-ProteinID:
ACM05962
UniProt:
B9KXI3
LinkDB
All DBs
Position
complement(175086..177932)
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AA seq
948 aa
AA seq
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MTGFMDATEAVSLPESIEQFSVFYPFRFDPFQLEAMLAFLEGKSVMVAAPTGTGKTVVAE
FGVYETFRRGARVMYTTPIKALSNQKFRDLRAIYGDNVGLLTGDVTENPHAPIVVMTTEV
LRNMLLQTPWELDSVQCVIFDEIHYLADPERGTTWEESIILCPEHIQLICLSATVSNAQE
IADWISRTHRPIQLIVHTERAVPLALWYFYDRKLRLVIDHHGRQVADYSNVGGEIRALIG
RGGLTAERRREAEEAEPPPWEIIQALAAEDMLPAIYFLFNRRDCEDYATRLAMMRVNLVR
DRATRQRIAHVIESFLASLRPEDRELSQVQTIVQLAAKGIGFHHAGLLPILKQLVEVLFS
QGLMKVVFATDTLALGVNMPARTVVIGRMTKWDGRRRRLLTPNEFQQMAGRAGRRGMDER
GNVVVPYSPWISFKEVLAVATGELEPVRSAFTIRYNTVLNLWDPPRGDRVRQLFQESLAQ
YQAAQRVRLLEEEILQVGHELETVPRGCLLGLDGDELLYDYRNIVAQLNHAKSQERHLEH
DLAQLEADLDDRPWAVPSRPVLRRLIREMAPGTPLHTRERGWVLFLNRLPYGGIALVLTR
EGSAELLTEYRQIDYVPHGIEPVPIPEALTLLAQPVSDVRGIVSTEAFEEIWRAFAARPL
PDLDAMLLEHRRQVEARLAPERRRIEERLQTIQQTLHELTQQRFRHPCHACQRRKEHQRN
LQRIARLEQERAELEAQLGREIAAEERRVRELLRGIRNVLEHFGYLHRGYPTSKADTLAD
VFDTNGLIICEMLDRDFFKGLEPADVAEVFSWFAFDRETRFANHFTLPTKLVLLRRRLES
LEQEVFEVERRNGLALSTGHHEGFYGAMRAWCNGATMAEITELIELSEGDLVLTFNKSLD
LMRQVREMLEKLYPDHPLRWSIATAEALARRDIIEQSLMIGLLPPIGT
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggattcatggacgcgacagaagcggtctcgctacccgagagcatcgagcagttt
tccgtgttctatcctttccgattcgatcccttccagttggaggcgatgctcgccttcctg
gagggaaaatcggtcatggtcgctgctcccacgggaaccggaaagacggtcgtcgctgag
ttcggcgtctacgagacgttccggcgcggtgcgcgtgtcatgtacacgacgccgatcaag
gcgctcagcaatcagaagttccgcgacctgcgagcgatctacggggacaacgtcggtctc
ttgaccggcgacgtcaccgagaacccacacgccccgatcgtggtgatgacgaccgaagtc
ttgcgcaacatgttgctccagacgccttgggaactcgacagcgtccagtgcgtgatcttc
gacgaaattcactacctcgctgacccagagcgcggtacgacatgggaggaatcgatcatc
ctctgccccgagcacatccagctgatctgcctgtcggcgacggtctccaatgcgcaagag
attgccgactggatcagtcgaacccatcggcccatccagctgatcgtccacaccgagcgc
gctgtccccttggcactctggtacttctacgacagaaagttgcggctcgtcatcgatcat
cacggccgtcaggtggctgattactccaatgtcggcggcgaaatccgcgcgctcatcgga
cgcggtgggctcacggccgagcgtcgccgcgaggccgaggaagccgaaccaccaccgtgg
gaaatcatccaggcactcgcggccgaagatatgctgccggcgatctacttcctcttcaac
cggcgcgactgcgaggactatgcgacccgcctcgcgatgatgcgagtcaatctcgtgcgt
gaccgcgcgactcggcaacggatcgcccatgtcatcgagtcgttcctcgccagcttgcgg
ccagaagaccgcgaactgagccaggtccagacgatcgtccagctcgctgccaaggggatt
gggtttcaccatgcgggattgctgcccatcctcaagcagctcgtcgaggtgctgttcagt
cagggcttgatgaaagtcgtcttcgcgaccgacacgctcgcgctcggtgtcaacatgcct
gcccgcaccgtcgtcatcggccgcatgaccaaatgggatggacggcgccggcgactactc
acacccaacgagttccagcagatggccggccgcgccggacgccgcggcatggacgaacgg
ggaaacgtcgtcgttccgtacagcccctggatctccttcaaggaagtgctcgccgtcgcg
actggcgaactcgagccggtccggtcggccttcaccatccgctacaatacggtgctcaat
ctttgggatccaccacgcggcgaccgggtccgccagctgttccaagagagcttggcccag
taccaagccgctcagcgtgtccggctcttggaggaggagattctccaggtaggccacgaa
ctggagacagtgccgcgcggctgtctcttggggctggacggcgacgaactgctctacgat
taccgcaacatcgtcgcccaactcaatcacgccaagagccaggagcggcacctggagcac
gacctggcgcaactggaggccgatctcgacgaccgtccctgggccgttccttctcggccg
gttttgcggcggctcatccgcgaaatggctcctggaacaccactccacacgcgcgaacgc
ggctgggtgctcttcctcaatcgcttaccgtacggagggatcgcgctggtactgacgcgc
gagggctcggccgaactcctgaccgagtaccggcagatcgactatgtcccgcacggtatc
gaaccagtaccgattccggaagccctgacgctcctggcccagccagtgagcgatgtccgg
ggaatcgtcagcacggaagcctttgaggagatctggcgtgcattcgcggcgcgcccgctc
cctgatctcgatgccatgctgctcgagcaccgtcggcaagtcgaggcgcgcctcgcaccc
gagcgccggcggatcgaggaacgcctccaaaccatccagcagactctgcacgagctgacg
cagcagcgcttccgccatccctgtcacgcttgccagcggcgcaaggaacaccagcgcaat
ttacagcggatcgcccggctggagcaggagcgggcggaactcgaagcccaactcgggcgc
gagatcgcggcagaagagcggcgcgttcgcgaacttctgcgcggcatccgcaacgtgctc
gaacatttcggctatctgcatcgcgggtatcccaccagcaaggctgacactctggccgat
gtcttcgacaccaacggcctcatcatctgcgagatgctggatcgcgacttcttcaagggg
ctggaaccagccgacgtcgctgaggtcttctcctggttcgccttcgatcgcgagactcgc
ttcgccaatcactttacgttgccgacgaagctggtcctcctgcgacgccgtctcgaaagt
ctggagcaggaagtgttcgaggtcgagcgacgcaacggcctcgcgctctccaccggtcac
cacgagggtttctacggtgccatgcgcgcctggtgcaacggtgcgacgatggcggagatt
acggaactcatcgaactcagcgagggtgatctcgtcctcaccttcaacaagtcgctcgat
ctcatgcggcaagtccgcgagatgctcgagaagctgtacccggatcacccgctccgctgg
agcatcgcgaccgccgaagccctcgctcgtcgcgatatcatcgaacaatcgctgatgatc
gggttgctcccgcccatcgggacgtga
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