Thermomicrobium roseum: trd_0207
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Entry
trd_0207 CDS
T00845
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tro
Thermomicrobium roseum
Pathway
tro03030
DNA replication
tro03430
Mismatch repair
tro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
trd_0207
03430 Mismatch repair
trd_0207
03440 Homologous recombination
trd_0207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tro03032
]
trd_0207
03400 DNA repair and recombination proteins [BR:
tro03400
]
trd_0207
Enzymes [BR:
tro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
trd_0207
DNA replication proteins [BR:
tro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
trd_0207
DNA repair and recombination proteins [BR:
tro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
trd_0207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
UVR
Rv2179c-like
RNase_H_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ACM05471
UniProt:
B9KXM0
LinkDB
All DBs
Position
complement(213313..215394)
Genome browser
AA seq
693 aa
AA seq
DB search
MSDQPVEPAYDRLRSRARQLLLARGGIASEEQLIEGLFGSLGNRRLWAPFLAQLLETDAE
IVRRPDGTWALRRRPLVPSRGWPRSFVALDVETTGLRPARHRIIEIGAVRYEDGCCVERF
SVLVNPHRRLPVYIVRLTGIRDEDLLTAPSFVDVAAAFRVFLGESTVIGYNVGFDLDFLN
AELRRIGQGPLPNPALDVLPLARALLTANGRYDLDAICRSIGLARGTRHRALPDAEATAV
LYLHLVERAEQVGYRSPSDLQPAATRRTIVVEPVARGRAVLDQRLLADTPELPGVYLMRD
ALGRVLYVGKARNLRQRVRSYFSQPLGYTRKMDGLLESVAEIETVVTGSELEALLLESQF
VQRYKPPYNTQLRNHEAYPYVKVELGRPWPRLMLARQRDDDDAVYVGPFRSTAAARSVVE
LLHQLLPLRTCHRSFRDARSYGRPCLQLTLGRCIGPCTGCVTPDEYRALVDCALRYLSGE
TSVVVERAQQLLADAVERLDFERAARLRDLLRRSEELVFSHRLVRQTISGRPCVIVTPCP
ETGDRAFLLIVAGRLWARVVADPREHDAAVAARLGAAWERAQQAAPWTLDQDSLDAAVII
ARWLSEHAEDPTVFFLEHPVDWLALVRNGRSLPASAFAVHAPVDDENGTTKRTRGADSER
GTQCEGTPGKHRRARPSLHALRSMADPHSGGAR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccagcccgtggagccagcctacgatcgtctccgcagtcgagctcggcagctc
ttgttggcgcgaggagggatcgccagcgaagagcagctgatcgaggggctctttggctcg
ctcggcaaccgccggctgtgggcaccattcctggctcaattgctggagaccgacgcggag
atcgtccgtcgaccggatgggacctgggcactccgacgtcgcccgctggtacccagcagg
gggtggcctcgctcgttcgtcgcgctcgatgtcgaaaccaccggtctccgcccagcacgg
caccgcatcatcgagatcggcgcagtgcgttacgaggacggctgctgcgtcgagcgcttc
tcggtcctcgtcaacccccatcggcgcttgccggtctacatcgtccgtctgaccgggatc
cgggacgaggatctgctgacggcaccgtcgttcgtcgatgtggccgccgcatttcgtgtc
tttttgggcgagagcacggtcatcggctacaacgtggggttcgacctcgattttctgaac
gccgaactccggcgcatcggtcagggaccgctccccaatcccgcactcgacgtcttgccg
ctcgcccgggcacttctcaccgcaaacggccgctacgacctcgacgcgatctgtcgatcc
atcggtctcgctcggggcacccgtcaccgtgcgctaccggatgccgaagcgactgccgtc
ctctatctccacctcgtcgagcgagccgagcaggtcggataccgctcgccgagcgacctc
cagccagctgccacgcggcgaacgatcgtcgtcgagccggtcgcccgggggcgcgcagtc
ctggaccagcgcctgctggccgacacacccgaacttccgggggtgtatctcatgcgcgat
gcgctgggacgtgtcctgtatgtcggcaaggcgcgcaatctcagacagcgagttcgctcc
tacttcagtcaaccactgggatacacccgcaagatggacggcttgctcgaatcggtggcc
gagatcgagacggtcgttaccggctcggagttagaagcactgcttttggagagtcaattc
gtccagcggtacaagccgccgtacaatacgcaactccgcaatcacgaggcatacccctac
gtgaaggtcgagctcggtcgcccctggccgcgcctgatgctggctcgtcagcgtgacgat
gacgacgccgtgtacgtcgggccttttcggagcacggctgctgcccgctcggtcgtcgag
ttgctccaccaactcctccctttgcgcacctgccaccgatcgttccgggatgcccgttcc
tatgggcgcccgtgcttgcaactgacgctgggacgctgtatcggcccatgcaccggatgc
gtgacgcctgacgagtaccgagcgctcgtcgactgcgcgctgcgttatctcagcggcgag
acgagcgtcgtcgtcgaacgtgctcaacagcttctcgctgacgcggtggagcgactcgac
ttcgaacgagcagcgcgcttgcgcgatctcctgcggcgcagcgaggaactcgtgttcagt
catcgattggtccgccagacgatcagcggacgaccgtgcgtcatcgtcactccctgtcct
gagaccggcgatcgcgcctttctcctcatcgttgccggacgactctgggcgcgtgtcgtg
gccgatccgcgcgagcacgatgcagccgtggccgcccgattgggagcggcctgggaacgc
gcccaacaggccgctccctggacgctcgaccaggactcgctcgatgccgcagtgatcatc
gcgcgctggctgtccgagcacgcggaggacccgaccgtcttcttcctcgagcatccggtg
gactggctcgcactggtgcggaacggtcgatcgctgcccgcgtcggctttcgctgtccat
gccccggtggatgacgagaacgggacgacgaaacgaacgagaggagcagacagtgagcga
ggaacgcagtgcgagggaactcctggaaagcatcgccgagcgcgtccgtcactgcacgcg
ctgcgatctatggcggacccgcactcaggcggtgccaggtga
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