Thermomicrobium roseum: trd_0229
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Entry
trd_0229 CDS
T00845
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tro
Thermomicrobium roseum
Pathway
tro00521
Streptomycin biosynthesis
tro00523
Polyketide sugar unit biosynthesis
tro00525
Acarbose and validamycin biosynthesis
tro00541
Biosynthesis of various nucleotide sugars
tro01100
Metabolic pathways
tro01110
Biosynthesis of secondary metabolites
tro01250
Biosynthesis of nucleotide sugars
Module
tro_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
trd_0229 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
trd_0229 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
trd_0229 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
trd_0229 (rfbB)
00525 Acarbose and validamycin biosynthesis
trd_0229 (rfbB)
Enzymes [BR:
tro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
trd_0229 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
adh_short
NmrA
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
ACM06140
UniProt:
B9KXP2
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Position
240059..241093
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AA seq
344 aa
AA seq
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MSDAVFRRILITGGAGFIGSHFVRLALAAGIPSVVVLDKLTYAGSLLNLEEVLDDPRVRF
LEGDIADPAAVAEAMAGCDAVVNFAAETHVDRSLLEPAAFIRTNVWGTMVLLEQALRLGV
GRFLHVSTDEVYGEVLSGSVSEDEPLRPRNPYAASKAAAEHFVFAYWTSYGLPVLVTRGC
NTYGPYQHPEKFIPLAITNLLTGRPIPLYGDGLHERDWLYVEDHCRAIWTVLVRGEPGQA
YNIGAGQHRPNIAVARALVRLLGADPSAIVHVADRPGHDRRYAVDWSRLRALGWRPMVDF
EDGLARTVAWYRARTDWWSARRDAAFAAYYARNYQGREGYRNQP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgcggtgttccgacgcatcttgataaccggcggggctggcttcatcgggagt
cacttcgtccgtctcgcgctcgcagctggcatcccgagcgttgtcgttctcgacaagctc
acctatgccgggagtcttctgaacctggaagaggtgctcgacgatccgcgtgtccgtttc
ctcgagggagatatcgctgatccagcggcagtggccgaagcgatggccggctgcgacgca
gtggtcaatttcgcggccgagacgcatgtggatcgctccctcctggagccggcggccttt
atccggacgaacgtgtggggcaccatggtgcttctcgagcaggcgctccggttgggtgtc
ggtcgttttcttcacgtgagcactgacgaagtctacggtgaggtgctcagcggttcagtc
agcgaggacgagccgctgcggccccgcaatccctacgcggcgagcaaggcagccgcagag
cacttcgtcttcgcctattggacgagttacggcctccccgtgctggtgactcgtggctgc
aatacctacggtccttaccagcatccggaaaaattcattcccttggccatcaccaatctt
ctcactggccgaccgatccctctctatggtgacggactgcacgagcgcgactggctctac
gtcgaggatcactgccgagccatctggaccgtgctggtgcgcggtgagcctggtcaggcc
tacaacatcggagcagggcagcatcgaccgaacatcgcggtggcgcgagcgttggttcgt
ctgctcggcgccgacccgagtgccatcgtgcatgtcgccgatcggcccggacacgatcgg
cgctatgccgtcgattggagtcgcttgcgggcgctgggctggcggccgatggtcgacttc
gaggacggtttggcgcggacggtcgcttggtatcgggcgcggacggattggtggtcggca
cgccgcgatgccgcgttcgccgcgtattacgcgcgcaattaccagggacgagaaggatac
cgcaaccagccgtga
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