Thermomicrobium roseum: trd_0232
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Entry
trd_0232 CDS
T00845
Name
(GenBank) putative oligopeptide-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
tro
Thermomicrobium roseum
Pathway
tro01501
beta-Lactam resistance
tro02010
ABC transporters
tro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
trd_0232
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
trd_0232
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
trd_0232
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tro02000
]
trd_0232
Transporters [BR:
tro02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
trd_0232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF6381
Motif
Other DBs
NCBI-ProteinID:
ACM05452
UniProt:
B9KXP5
LinkDB
All DBs
Position
242198..243919
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AA seq
573 aa
AA seq
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MGRERLLSLLLAITVLLTGCRFSLPLSRSATPTPDFVLPVEASPTPPAPATLSVTATLLP
GAVLTAPPVPTPPSSSAEQVLILAGTPEGPLTLDPALVRDVESAFVVQQLFRGLVRFDRA
LVPVPELAERIEIGPDGRSYTVRLRADARFHDGDPITAADVKYSLERACDPALADGDGRA
LPAWGFLRDLVGAQARMLGRRSDVPGIEVVDERTLRLHLVEPSPTFLLRLALPVASVVKR
DAVERGPDWWRQPVGSGPFRLVRWTDEEIVLGRHPQYRPAPAYLREVRIRIGPAALSPLN
QYERGQLDVAAVPVWAVDRLTAPESPYRDQLIAQPLLGGTYVFFNPGVPPLDDLVVRRAL
IQAFPRAKVAGVTLQGKVPLAQGLIPEGMPGGPWEATVLPYDPGEARRVLTGRSLRVEVA
SAGSDVAIMLGQVWRRELGIEVEVLQYDWPDYLTELDARRLPIFVFSWVADYPDPEAVID
ALFAEESPNRPIDYRNAAVQELLAAARRATDPQERHALLLAAQQQILDDVVVLPLTFDVE
YLLVAPRVRDLPVTPLGILGLERVWIAPERAAR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgagcggcttctctcgcttttgctcgccatcaccgtgctgctcactgggtgt
cggttcagtctgccgctcagccggtcggccactcccactcccgatttcgtactccctgtc
gaggcgtcgccgactccccccgcgccggcgacgctgtcggtgaccgcaacactcctgccg
ggagccgttctgaccgcgccgccagtgcccacgccaccgtcctcgagtgcggagcaggtg
ctcatcctggctggcacgccggagggaccgctgacgctcgatccggcgctcgtgcgggac
gtggaatcagcgttcgtcgtccagcagctcttccgcggtctcgtccggttcgatcgcgcg
ctcgtccctgtcccggagctggccgagcggatcgagatcgggcccgacgggcgctcctac
acggtccgtctgcgtgctgatgcgcggtttcacgatggagacccgatcaccgcggcggac
gtcaagtactccctcgaacgggcctgcgatcccgctctcgctgatggcgatggccgcgcg
ttaccagcctggggtttcctgcgcgatctcgtcggtgcgcaggcgcggatgctcggccgc
cgcagtgatgtccccggtatcgaggtcgtggacgagcgaacgctccgccttcacctcgtc
gagccgagcccgacctttctccttcggttggctctcccggtggcgagtgtcgtgaagcgc
gatgctgtcgagcgcgggccggactggtggcgtcagccggtgggaagcgggcccttccgg
ctcgtgcggtggaccgacgaggaaatcgtgctgggccgtcacccacagtaccggccggcg
cctgcctacttgcgcgaagtccgcatccggatcggtccggctgccttgtccccgctcaac
cagtacgaacgggggcagctcgatgtcgctgctgttcccgtttgggcggtcgatcgcctg
accgcgcccgaatcgccgtaccgcgaccaactgatcgcccagccgctcctcggtggaacc
tacgtgttcttcaatccaggtgttccgccgctggacgacctcgtggtgcggcgcgctctg
atccaggcgttcccgcgcgccaaggttgcgggggtgacgctgcaggggaaagtgccattg
gcacagggactcatcccggagggaatgccgggaggtccttgggaagcgacggtgctgccc
tatgacccgggggaggcgcgtcgggtgctgaccggccgctcgcttcgtgtggaagtcgcc
agcgctgggagtgacgtcgcgatcatgttggggcaggtgtggcgccgcgagctcggaatt
gaagtcgaagtgctccagtacgactggcccgactacttgactgaactcgatgctcggcgc
ctaccgatcttcgtcttctcttgggtcgctgactatcccgatccggaggcggtgatcgat
gcgctcttcgctgaggagagtccgaaccggccgatcgactatcggaatgctgcggtgcaa
gagctcctcgcggctgcccggcgggccactgatccgcaggaacggcatgcgctgctcctg
gccgctcagcagcagatcctcgacgacgtagtggtgttgccgctgacgttcgacgtggaa
tacttgctcgtcgcaccgcgggtgcgcgaccttccggtcaccccattgggtatcctcggt
ctggagagagtttggatcgcgccggagcgtgctgcccgttga
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