Thermomicrobium roseum: trd_0378
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Entry
trd_0378 CDS
T00845
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
tro
Thermomicrobium roseum
Pathway
tro00450
Selenocompound metabolism
tro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
trd_0378
Enzymes [BR:
tro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
trd_0378
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
trd_0378
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Paralog
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Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
BPL_C
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
ACM05280
UniProt:
B9KY35
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Position
complement(379472..380731)
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AA seq
419 aa
AA seq
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MTSFTGTQPLDVERIRGDFPIFQRTVRGGRPLVYLDSAATSQKPASVIEALAGFYRTSNA
NIHRGIYELSEEASVLYEEARAKVARFIGASRAQEVVFVRNTTEAINLVARTWGTTALQP
GDVVVTTILEHHSNIVPWHQLAVERGIIVRFVDIDEHGRLRLDQLEELLDAYPVKLVAVT
HVSNALGTINPIPEIVRLAHRTGALVLVDGAQSVPHLPVNVRELGADFLAFSGHKMLAPF
GIGVLWARYDLLTSLPPFLGGGGMIRTVTTDGFSPGDVPARFEAGTPSVADAVALGAAID
YLESIGMAAIRQHERALLAYALPRLEEIPGIRLYGPVGDDRSGVISFTIGDVHPHDVAAV
LDQHGIAVRAGHHCTQPLMRRLGVVATTRASFYLYNAEDDVDRLIEALREVRRVFGVAG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgttcactggaacgcagccactcgacgtcgagcggatccgaggggacttcccg
atcttccagcggacggttcgcggcggcagacccctcgtgtatctcgatagcgcggcaacc
tcacagaagccagcgagcgtcatcgaggcgctcgctggcttctatcgtacgagcaacgcc
aacattcaccgcggcatctacgagttgagcgaggaggcctcggtcctctatgaggaagcg
cgcgccaaagtcgcgcgcttcatcggcgctagccgcgcgcaagaggtcgtcttcgtccgc
aatacgacggaggcgatcaacctggtggccagaacatggggtaccaccgcgctccagcca
ggagacgtcgtcgtgacgacgatcctcgagcaccactcgaatatcgtcccctggcatcag
ctcgccgtcgagcgcggaatcatcgtccgcttcgtcgatatcgacgagcacggccggctc
cgactcgatcaacttgaggagttactggacgcatatccggtcaagctggtcgctgtgacg
cacgtttcgaatgcactggggaccatcaatcccatcccggagatcgttcgtctcgcccac
cgtaccggtgcactcgtgctggtcgatggtgcacagagcgttcctcatctaccggtcaac
gtccgcgaactcggagccgatttcctggcattttccggccacaagatgctcgcgccattc
gggatcggcgttctctgggcccgctacgacttgcttaccagcttgccaccattcctcggt
ggcggtggcatgatccgcacggtcacgaccgacggtttttcaccaggtgacgtaccagcc
cgcttcgaggctggaacaccgagcgtggctgacgcggtcgccctgggagccgcgatcgac
tatctggagtcgatcgggatggcagccatacggcaacacgagcgagctctgctggcctac
gctctcccccgcttggaggaaattccgggcatccggctctatgggccggtcggtgatgat
cgaagcggtgtcatcagcttcacgatcggcgacgtccatccccatgacgtcgccgccgtg
ctcgatcagcacgggatcgctgtccgcgctggccaccattgcacgcaacccttgatgcgg
cgcctcggcgtcgtggcgacgacgcgcgccagtttctacctttacaatgccgaggacgac
gtggatcgcctcatcgaggcactccgcgaggtacgtcgcgttttcggcgtcgcggggtga
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