Thermomicrobium roseum: trd_0394
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Entry
trd_0394 CDS
T00845
Name
(GenBank) putative ABC transporter, substrate binding protein (oligopeptide)
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
tro
Thermomicrobium roseum
Pathway
tro01501
beta-Lactam resistance
tro02010
ABC transporters
tro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
trd_0394
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
trd_0394
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
trd_0394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tro02000
]
trd_0394
Transporters [BR:
tro02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
trd_0394
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACM04538
UniProt:
B9KY51
LinkDB
All DBs
Position
394307..396139
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AA seq
610 aa
AA seq
DB search
MHVRNEVHRAMSAVSQDRRVWLLEDVRCEMKRGRIRALLRLVSVLALALPILAACARGQA
TPTPAPSGATPTAGQTPAAVSSPTQAAVTTPTGEKVLRIHEYTYPDVFDPQKSSFSNEIA
VLHMNYEGLTRLDKDLNTVPAAAESWEFNQDGTVVTFHLRAGLKYSDGTPLTAERFRYAV
ERTCDPKTAGEYQSILFDIVGCEEFAGTDPNDQAAYEAARQKLGVEAPDDRTLIVRLTHP
APYFPTIASLWVFYPARKELIEQGGENWWKDPKLQIGNGPFQMVEVVEDQRIRFVANTNY
WEGRPKLDAVEIIYQKESSVALEAYKAGQLDMFSPDPSQLPAIKSDPELSKQLVTYPAAT
TIQLSFNLTKEPFTDKKVREAFAYAFDRKTYCEQIRNGDCTPTLEWIPPGIPGHIGTDKY
GFDPAKAKQALAESKYGGPDKLPEIKLTFNSDDPAARPRVEWIAGQYRDILGVNITLEPV
DGKTLVAMRKDPSTYPQMTMAGWIQDYPDPQNWLSVYWKCDATFAQRFGYCNKQFDELVT
KADQELDQQKRIELYKQAHQILIDDVPGPFLYNPLNIWLVKPSVTGYSPTPSDDAFPGEF
ASLMTLDIKK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgtccggaacgaggtccaccgagcgatgagcgcggtgagtcaggatcgtcgagtc
tggctgttggaagacgtgaggtgcgagatgaaacgagggcgaatacgtgcgcttttgcgt
ctcgtctcggtgttggcgctggcgttaccgattttggcggcgtgcgcgcgcggtcaagcg
acgccgactccagcaccgagcggggcaactccgacagcgggccagacgccggctgctgtg
agcagtccgacgcaagcagcagtcacaacgccgactggtgagaaggtcctgcggattcac
gagtacacgtatccggacgtcttcgacccgcagaagagctccttctcgaacgagatcgcc
gttctccacatgaattacgagggactcacgcggttggacaaggatctcaacaccgtgcca
gccgccgctgagtcgtgggaattcaaccaagatggtacggtcgtcactttccacctgcgc
gccgggttgaagtacagcgatggaacgccgctcacggctgagcgcttccgctacgcggtc
gagcggacgtgtgatcccaagacagctggagaataccaatcgatcctgttcgacatcgtg
gggtgcgaagagttcgctggtaccgatcccaatgatcaggcagcgtatgaggccgctcgt
cagaaactgggtgtcgaggcaccggatgatcggacgctgatcgttcgcttgactcatccg
gctccctatttcccgacgatcgcgtcgttgtgggtcttctatccggcccgcaaggagctg
atcgagcaaggcggtgagaactggtggaaggatcccaagcttcagatcggtaatggcccg
ttccagatggttgaagtcgtcgaggatcagcgcatccgcttcgtcgcgaacacgaactac
tgggaaggccggccgaagctggatgcggtcgagattatctaccagaaagagagctcggtc
gcgctcgaggcgtacaaggctggacagctcgacatgttctcgccggatccctcacagctc
ccagcgatcaagagcgatccggagctgtccaagcagctcgtgacctacccggcagcgacg
accattcagctctccttcaacttgacgaaggagccgttcacggacaagaaggtgcgcgag
gctttcgcctacgcattcgatcgcaagacctactgcgagcagatccggaacggcgactgc
acaccgacgctcgaatggattccaccgggtattccgggtcatatcgggaccgacaagtac
gggttcgacccggcgaaagccaaacaggctctggcagagtcgaagtacggtggcccggac
aagctaccggagatcaagttgacattcaatagcgacgatcctgcagcgcgtccgcgagtc
gagtggattgctggacagtatcgcgacatcctcggggtgaacatcacgctcgagccggtg
gatggcaagacactcgtcgcgatgcgcaaggatcccagcacatacccgcagatgaccatg
gcgggatggatccaggactatccggatccccagaactggctcagcgtctactggaagtgc
gatgcgacctttgcccagcgcttcggctattgcaacaagcagttcgatgagctcgtgacc
aaggccgatcaggaactcgaccagcagaagcggatcgagctgtataagcaggcgcatcag
atcctgatcgacgatgtaccggggccgttcctctataacccgctgaacatctggctggtt
aagccgtccgtgaccgggtacagcccgacgccgagcgacgatgcgttcccgggcgagttc
gcgtcactcatgacgctggatatcaagaagtag
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