Thermomicrobium roseum: trd_0436
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Entry
trd_0436 CDS
T00845
Name
(GenBank) beta-lactamase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
tro
Thermomicrobium roseum
Pathway
tro00550
Peptidoglycan biosynthesis
tro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
trd_0436
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tro01002
]
trd_0436
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tro01011
]
trd_0436
Enzymes [BR:
tro01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
trd_0436
Peptidases and inhibitors [BR:
tro01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
trd_0436
Peptidoglycan biosynthesis and degradation proteins [BR:
tro01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
trd_0436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ACM05129
UniProt:
B9KY91
LinkDB
All DBs
Position
431933..433027
Genome browser
AA seq
364 aa
AA seq
DB search
MASVLMLALLGTTTRAVAVVPEVSSRPAPSSAYQPAERPTLTARASFAVDITAGVELWAQ
EADRPLPPASTTKLMTALVVRRWLRPDESITIRSDDLVDPAVYANAGFQPGDRVTVTDLL
AAMLIASAGDAALALARVAGERIDPEHDVPRTAFIDAMNQEAARLGLRHSWFATPDGRDV
PGQTVSARDLAIIAAAVLSDPLLAELVATRTREIEIAGPQSRRITVVNTNQFLTEPDALG
VKTGTSVAAGQCLVAAVRRGNDIVVLVLLSSRDRYADARALLTYLDRQYRWFTLDGRSFA
ELARLAREGIVPALVPTVVVANETADQVRVIIDRQHSSADVVGTVRLRIGTSDLFIVPLL
RVER
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggtgctcatgctcgctcttctcgggacgacaacgcgagcggtggctgtcgtc
ccggaggtgtccagccgccccgcgccgtcatcggcctaccagcctgccgagcgccccacg
ctcactgcccgggcgagctttgcggtcgatatcacggccggggtggaactctgggcgcaa
gaagctgatcgccctctgccgccagcgagtacgaccaaactgatgactgctttggtcgtc
cggcgctggctccggccggacgagtcgatcacgattcggtccgatgacctcgtcgatccg
gccgtctatgccaatgctggcttccagcctggtgatcgcgtaacggtgaccgatctcctg
gccgccatgctgatcgcctcggccggtgatgcggcactcgccctcgctcgggtcgctggg
gagcggatcgatccggaacatgacgtgccgcggactgccttcatcgacgcgatgaaccaa
gaagccgcgcgtctcggcttgcggcattcgtggttcgcaacgccggatgggcgtgacgtg
cccggtcagaccgtctcggcgcgcgatctcgcgatcatcgccgcagcggtcttgagcgac
ccgttgctcgccgagctcgttgcgacacggacgcgcgagatcgagatcgccgggccacag
agtcgccggatcacggtcgtcaacacgaaccagttcctcaccgagcccgatgcgctcgga
gtcaagacaggcacctcagtggctgcgggacaatgcctggtggccgcggtacgacgcggc
aacgacatcgtggtactcgtgttgctgagcagtcgcgaccgttacgctgacgcgcgggca
ctgctgacctatctcgaccggcagtaccggtggtttaccctcgatggccgatcgttcgcg
gaattagccaggctggcgcgagagggaatcgttccggctctcgtgccgaccgtcgtggtc
gcgaacgagacagctgaccaggtgcgggtcatcatcgatcggcagcactcatcagccgat
gtcgtcggtacggtacgattacggatcggaacgagcgacctcttcatcgtgccgctcctg
cgtgtggagcggtga
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