Thermomicrobium roseum: trd_0520
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Entry
trd_0520 CDS
T00845
Name
(GenBank) spermidine/putrescine-binding periplasmic protein precursor
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
tro
Thermomicrobium roseum
Pathway
tro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
trd_0520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tro02000
]
trd_0520
Transporters [BR:
tro02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
trd_0520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Lipoprotein_8
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ACM04774
UniProt:
B9KYH4
LinkDB
All DBs
Position
complement(516833..518038)
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AA seq
401 aa
AA seq
DB search
MNRPELIQRWIRDWQQGRLSRRELLRRVTLLGMSSFALANLLTACARSQPTPTPASTEAS
PRVGAAIPDYIDRSKLDKELNFYNWSEYIDPDILTEFQETYGVKVTMDTYASNEDLLAKL
QGGATGYDVIVPSDYMVSIMINLGLLEPLDYSVIKTIANIDPENLKPYYDPDNTYSVPYM
WGTSGYSYDTSVLGEDLASWKEVFEPRPEVRGKVVMLDDQREVIGAALMYLGYEINETSD
DALAKAKQLLLTQKPYVLAYSSQNNDDLLVAGEALIAHIWTGDALMSEQEKPTLRYVIPT
EGCTVWQDNLCVPKTAPHKYTAMVFIDFLNRPDIAGRNANYIMYGSPNKAAREQGYIDQE
VLNNPGVYPPPEVWKRLQWIKDVGEEGALKLDRLWTEIKTG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaccggaactcatccagcgatggatccgcgattggcagcagggtcggctctcg
cgccgtgaactcttgcggcgagtgacactgctcggcatgagttcgttcgcgctcgccaac
ttgctcactgcctgcgctcgatcgcagccgacgccgacacccgcgtccactgaggcatca
ccgcgcgttggggctgcaatccctgactatatcgatcgcagcaagctggacaaggaactc
aacttctacaactggtcggagtacatcgatccggacatcctgaccgagttccaagagacc
tatggcgtcaaggtcacgatggacacctacgcttccaacgaggatctactcgccaagctc
caaggtggcgcgacgggctacgacgttatcgttccctccgactacatggtcagcatcatg
atcaacctcggcctcctcgagccactcgactactctgtcatcaagacgatcgcgaacatc
gaccccgagaatctgaaaccgtactatgaccccgacaacacctatagcgtgccgtacatg
tggggtacctccggttacagctacgataccagtgtgctcggcgaagacctcgccagctgg
aaagaagtgttcgaaccacgacccgaggtgcgcggcaaggtggtcatgttggatgaccag
cgcgaggtgatcggggccgccctcatgtatttgggctacgagatcaacgagaccagcgat
gacgcactcgctaaagcgaagcaactactcctcacgcagaagccgtacgtgctcgcctat
tccagccagaacaacgatgacttgctcgtcgcgggcgaagcactgatcgcccacatctgg
accggcgatgcgctcatgagcgagcaagagaagccgaccctccgctatgtcatccctacc
gaaggttgcacggtctggcaggacaacctttgtgttcccaagacggccccgcacaagtac
acggcgatggtcttcatcgactttctcaaccggcccgacatcgctgggcgcaacgccaac
tacatcatgtacgggagcccgaacaaagcagcccgagagcaaggctatatcgaccaagaa
gtgctcaacaatccgggtgtttatccgccaccggaggtttggaagcgacttcaatggatc
aaggacgtcggtgaagagggcgctctcaagctggatcgtctctggacagagatcaagacg
ggctga
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