Thermomicrobium roseum: trd_0603
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Entry
trd_0603 CDS
T00845
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tro
Thermomicrobium roseum
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tro03016
]
trd_0603
Enzymes [BR:
tro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
trd_0603
Transfer RNA biogenesis [BR:
tro03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
trd_0603
Prokaryotic type
trd_0603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
FAM186A_PQQAQ
Motif
Other DBs
NCBI-ProteinID:
ACM05790
UniProt:
B9KYQ3
LinkDB
All DBs
Position
complement(595403..596314)
Genome browser
AA seq
303 aa
AA seq
DB search
MVDVCLLGTGGMMPLPDRWLSALLVRCEGHVVLLDCGEGTQISWRYTGWSFRDLDAIVFT
HLHADHVAGLPGILYALAFADRQEPVRIIGPVGTAQVVAALRSIVPTLPFPVETLELSGT
SELELPGGLLLRALPVTHRIPCFAYTLHRPRGRRFDPQRAQALGIPMTLWHRLQRGETVE
FAGQLLTPDLVLGPPRRGITVAFVTDTRPTPELPGFVAGADLLVCEGMYGDTALLPRAIE
RGHMLMQEAAELARAASVERLWLTHFSPSLTDPEAWLPAIRAIFPASEIGPVHQTVTLRY
RDA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacgtctgtcttctcggcaccggtgggatgatgccgcttccggatcgttggctg
tccgctctccttgtccggtgcgaagggcatgttgtcctcctcgattgcggcgagggcacg
cagatttcctggcgatacaccggatggagcttccgcgatctcgatgcgatcgtcttcacg
cacctccacgccgatcatgtcgctggtctccctggtatcctctacgctcttgccttcgcc
gaccgtcaggagccggttcgcatcatcggccctgtcggtaccgcgcaggtggtcgctgca
ctgcggagcatcgtaccgactctcccgtttcctgtcgaaacactggagctctccgggacc
agcgaactcgaacttcctggcggactcctcctgcgcgccctgccggtcacacaccggatc
ccttgcttcgcatacacgctgcaccgtccacggggacgccggttcgacccacagcgagcg
caggcgctcggcatcccgatgacgctctggcaccgcctgcagcgtggagaaacggtcgag
ttcgcgggacagctcctgacccctgatctcgtgctcggcccgccgcgacgcggtatcacc
gtcgccttcgtgaccgatacccgacccaccccagagcttcccgggttcgtcgctggagcg
gacctcctggtctgtgaggggatgtacggcgacaccgctctgctgccgcgagcgatcgaa
cgcggccatatgctgatgcaagaggcagccgaattggcccgtgccgccagcgtcgagcgc
ctctggctcactcattttagtccttcgctgaccgatcccgaagcctggttacctgccatt
cgcgcgattttccccgcgagcgagatcggccccgtgcaccagactgtgacgctgcgttac
cgggacgcgtga
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