Thermomicrobium roseum: trd_0770
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Entry
trd_0770 CDS
T00845
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tro
Thermomicrobium roseum
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tro03016
]
trd_0770
Enzymes [BR:
tro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
trd_0770
Transfer RNA biogenesis [BR:
tro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
trd_0770
Prokaryotic type
trd_0770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PUA_3
DUF664
Motif
Other DBs
NCBI-ProteinID:
ACM06364
UniProt:
B9KZ57
LinkDB
All DBs
Position
complement(758252..759160)
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AA seq
302 aa
AA seq
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MHGILLVDKPRGWTSHDVVQWVRTRLRVQTVGHGGTLDPAAEGLLVIAVGIATRLVRHAA
DADKSYVAHIVLGTGTTSDDLEGEPLAASPLSLYRPSLRDVQSALAEFLGEYEQQPPIYS
ALKVGGVAAYRRARAGQPVPLKRRVVRVNSLRLVQYSYPDLIVSLDCGKGFYVRSFARDL
GTRLGTGAYLHGLVRTRVGRFSLASAWSIDELNRVLTPSSWPLIARHPDEFVAELPVLLV
PERELRAWYHGAPVRCSASSSPGTTARAYAPDGNWIGLAHFDPQKRYWQPVLVHRDGSGW
RG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgcacggcatactcctggtggacaagccacgcggttggacatcccacgacgtggtgcaa
tgggtccgcacgcgcctccgcgttcaaacggtcggtcacggcggcacgctcgacccggcc
gccgaagggttgctcgttatcgctgtcggtatcgccacgcgcctcgtccgacacgcagcc
gatgcggacaaaagctatgtcgcacacattgtcctcggtaccgggacgacgagcgacgat
ctcgaaggtgaaccgctggcagcctcaccgctatccctgtaccgaccctcgctccgagac
gtccagtcggcactcgccgagttcctcggcgaatacgaacaacagccgccgatctattcg
gcactgaaagttggcggcgtcgcagcctaccggcgtgcccgggctggtcagccagtgccg
ctcaaacgacgcgtggtgcgagtcaacagcctacgtctcgtgcagtattcgtatccggat
ctcatcgtctcgctcgactgtgggaagggattctatgtccgttcctttgctcgcgacctc
ggtacccgcttgggcactggcgcttacctgcacggcctcgtccgcacgcgcgtgggccga
ttttcgctcgcttccgcctggtcgatcgacgagttgaatcgtgtgctcacaccatcatcc
tggccattgatcgctcgtcacccggatgagttcgttgcggaactccccgttttgttggtt
cctgaacgggaacttcgagcatggtatcatggcgcgccggtgcgctgttcagcgagcagc
tcacctggcaccactgctcgcgcctacgccccagatgggaactggatcggactcgctcat
ttcgacccacaaaagcgatactggcagccggtcctcgtgcatcgcgacgggtctggatgg
agaggctag
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