Thermomicrobium roseum: trd_0881
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Entry
trd_0881 CDS
T00845
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
tro
Thermomicrobium roseum
Pathway
tro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
trd_0881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tro02000
]
trd_0881
Transporters [BR:
tro02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
trd_0881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
OB_MalK
T2SSE
AAA_25
AAA_29
DUF5818
AAA_22
nSTAND3
SRP54
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACM05577
UniProt:
B9KZG1
LinkDB
All DBs
Position
complement(862582..863715)
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AA seq
377 aa
AA seq
DB search
MDGDVMATVKTMPASGPEAGLGARLQLIELTKVYGDVVAADRVTLDIAPGEFITLLGPSG
SGKTTTLMMVAGFVIPTSGQILVNGEDIAFRPPHKRNIGMVFQNYALFPHMTVAENIAFP
LKMRKWPRDRIEQAVREALQLVRLPGFEQRYPRQLSGGQQQRVALARALVFRPPVLLMDE
PLGALDKKLREEMQLEIKHIQESLNITTIYVTHDQEEALTMSDRIAVMRDGRIEQIGTPR
ELYEQPASEFVASFIGESNFLMGRLERRDGHAYLVTEDGWRVAIPDAEDLPAGEQVTVAL
RPERIVLGERRGENHAEATIEEIIYVGEATKFRVRLLGDRLLTVKQPSRLETMRWQRGER
VLLSWRAEDAVLLRGRH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtggatggtgacgtgatggcgacggtcaagacgatgcccgcttcgggcccggaagctggt
ctcggggcgcggctccagctgatcgaactcacgaaggtctacggggacgtcgttgcggct
gatcgagtcactctggacatcgctcccggtgagttcattaccttgctcggtccatcggga
tccgggaagacaacgacgctcatgatggtcgctggattcgtcattcccacgtccggccag
atcctcgtcaacggtgaagatattgcattccgaccaccccacaagcgcaatatcggtatg
gttttccaaaattatgcactctttcctcatatgaccgtcgctgagaatattgcgttccca
ttgaagatgcgaaaatggccgcgtgatcgtatcgaacaggcagtgagagaggcgttgcaa
ctggtgcgcctacctggctttgagcagcgctatcctcggcaactttccggcggtcagcag
cagcgtgtagccctcgcgcgggctttggtctttcgtccacctgttttgctcatggacgag
cctttgggggcgctggacaagaaacttcgtgaagagatgcaactggaaatcaagcatatt
caagaatcactgaatatcaccacgatctatgtcacccatgaccaggaagaagcgttgacg
atgtccgatcgtatcgccgtcatgcgtgatgggcgtatcgagcagatcggtacgccgcgc
gagttgtacgagcagccggccagcgagttcgtggccagcttcatcggggaatcgaacttt
ctcatggggcgactggagcgacgtgatgggcatgcttaccttgtcaccgaagacggctgg
agagtagcgatccccgatgcagaggatctgcctgccggcgagcaagtgacagttgctttg
cgaccagagcgaatcgtgctcggggagcggcgtggtgagaaccacgccgaggcgaccatc
gaggagatcatttacgtgggcgaagcgaccaaattccgcgttcgtcttctcggcgatcgg
cttttgacggtgaagcagcctagcaggttggagacgatgcgctggcagcgcggggaacgg
gtcctcctcagctggcgagccgaggatgcggtcctcctacggggacgacattga
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