Thermomicrobium roseum: trd_1145
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Entry
trd_1145 CDS
T00845
Name
(GenBank) putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
tro
Thermomicrobium roseum
Pathway
tro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
trd_1145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tro02000
]
trd_1145
Transporters [BR:
tro02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
trd_1145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
Motif
Other DBs
NCBI-ProteinID:
ACM04758
UniProt:
B9L0S5
LinkDB
All DBs
Position
complement(1134998..1136176)
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AA seq
392 aa
AA seq
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MSNRRIYSRRTVLRMLGAVSVISPLALSCRSSEPEGATPRSSPAARPSPTVVPSSGFQLP
EYVDRTRLEGELFVFNWGDYIDPDVLSDFERLTGVKVTVDTYDTNEQAIAKLQQGGIAYD
IVVPTDYAVQILIGLGLLEPLDRSVVRAIEHLDPNNLNGPYDPGNRYSVPYFWGTSGYAY
DTAVLGPDLASWEALFEPAEAARGKIVMHGYYRETIAAALLWLGYPLNETSDEALQRALE
VLKAQKPFVLTYTSENNDELLIAGEAVIAHCWTGQAILAKRERPTIRYVIPKEGCAVWQD
NLCVVKGAPHRYAAMVFIDYLCWPEIAARNASYVGYASPNRTAREQGLLDPDLVNDPAIY
LDDTTWKRLQWFKDLGPDYVKYDRIWTELRAG
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccgtcgaatctacagtcggcgaacagtgctcaggatgctcggtgcagtctcg
gtgatcagtccgctcgcgctgagctgccgaagcagcgagcccgagggtgcgacgccccgc
tcttctcccgctgctcgaccgtccccaacggtggtaccatcctccggcttccagttgcca
gagtacgtggaccggacacgcttggaaggtgaactcttcgtcttcaattggggcgactac
atcgatccggatgtgctgagtgacttcgaacggctgaccggtgtcaaggtgaccgtcgat
acgtacgacaccaacgaacaggcgatcgccaagctgcagcagggcggtattgcctacgat
atcgtcgtgccgaccgactacgcggtgcagattctgatcggcctcggtcttctcgagccg
ctcgaccgctctgtcgtgcgcgcgatcgagcacctcgatccgaacaatctcaacggcccc
tatgatccgggaaaccgatacagcgtgccgtacttctggggaacatccggttatgcgtac
gataccgccgttctcggtccggacctggccagctgggaagcgcttttcgagccagccgag
gcggcgcgcggcaagatcgtcatgcacggttactaccgggagacgattgcagccgcgctc
ttgtggctcggctatccactgaacgagacgagcgatgaggctctgcagcgagccctcgag
gttctcaaggcgcagaagccgttcgtcctcacgtacacgagcgagaacaacgacgagctc
ctgatcgccggcgaagcagtgatcgcgcattgctggacagggcaggcgatcctagccaag
cgagagcggccgacgatccggtatgtcatccccaaagaggggtgtgcggtctggcaggac
aacctgtgcgtcgtgaagggtgctccgcatcgctatgctgccatggtgttcatcgattat
ctctgttggccggaaattgccgctcgcaatgctagttatgtcggatatgccagcccgaat
cggacagcccgcgaacagggtttgctcgacccggatctggtgaacgatcctgcgatctat
ctcgacgatacgacgtggaagcgtttgcaatggttcaaagatctcggccctgattacgtg
aagtatgaccggatttggacggaacttcgcgcaggctag
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