Thermomicrobium roseum: trd_1266
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Entry
trd_1266 CDS
T00845
Name
(GenBank) RecF/RecN/SMC N terminal domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tro
Thermomicrobium roseum
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tro03400
]
trd_1266
DNA repair and recombination proteins [BR:
tro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
trd_1266
Archaeal homologous recombinant proteins
trd_1266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_29
AAA_15
CdvA
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ACM04878
UniProt:
B9L1K6
LinkDB
All DBs
Position
1251732..1254284
Genome browser
AA seq
850 aa
AA seq
DB search
MIPTRLVLRHFLCYRDPVEVDFTGLQLACLSGENGAGKSALLDAMTWALWEKARASNQHL
VSLGELETRVEFSFRLDGREYRVVRAYTSSGKKGSLLELHVRTEDGWYPLASSGKHTVQA
EIDRLLGISYSTFVNSVFLLQGRADEFTRQTPAKRKEILAELLELDRYERYREVAREEAK
RLHDERTRSEQMLAALREQAAQAPALRDQVTRLENALDAQRAQLAQLREQLKLRQERLYR
LQLEVERYRERSARHAELVRECAKRHEEKDRLEQRLATQQAILQRAPEIERRAQELDAVQ
RELDELGRIAAERQRIQQELLQRERDLESKRRERAVRKQALETRIKETEQALAQRPELQA
RLVQIDEELARLATLRERQAELDNQKVQREARRGELRALANQLRQQMKELQEQLQQLSAI
DAVCPVCLRPLTPEERARQEAQVRERGAQLRSTFDASRNEDLQLAKELEEIQQRRRELDA
ELRREGDLQAEGGKIRGDLEKLARQERELAQLRRELEQLSRSEEFDPEYRSLADEVQKLR
QQLTALVFDPERREALERRRRELEPVRQELLQLRDARTAVQHLAERLSELEREIATLETE
RVSLEAELAAWSPPERELETVHSELEQLKQREQSEEELIERLQSQLGALRQRLTDAEAAQ
DEAERVSRELDRLAREIAVLETLDRAFGKHGIQTMVFENVLPDLAEAANEILDRLPGNTL
RIDFVTQRDKTSGDGAIETLDILISDEFGQRPYELYSGGEAFRINFALRVALSLLLVERA
GRRLETLVIDEGFGTQDAKGREGLIQALQSVQDRFALILVITHLEDLKEQFPQRIEVYKT
SGGSQVTVIR
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgattcctactcgtctggttctccggcactttctgtgctatcgcgacccggtggaagtc
gattttaccggtctgcagctggcctgcctgtccggtgagaacggcgccggcaagtcggcc
ctcctcgatgcgatgacctgggcgttgtgggaaaaggcacgcgccagcaatcaacatctg
gtcagcctcggcgaactcgagacacgcgtcgagttcagcttccgtctcgacgggcgagaa
taccgggtcgttcgggcgtatacgagcagtggcaagaagggttcgctgctcgaactccat
gtcaggacagaggatggctggtatccgctcgcctccagcggcaagcacactgtgcaagcg
gaaatcgatcgcctgctcggcatcagttactcgacgttcgtcaattctgtctttctcctc
cagggaagagcggatgagttcacccgccagacaccggccaaacggaaagaaattctggcc
gaattgctcgagctcgaccggtacgagcgatatcgcgaggtcgctcgcgaggaagcgaaa
cgactccacgacgagcgcactcgctccgagcagatgctcgccgcactccgcgagcaggca
gcccaggcacctgcactccgcgaccaggtcacccggctcgaaaacgcgctcgacgcccag
cgagcgcagttggcacaactgcgcgagcagctcaagctcaggcaagagcgcttgtatcga
ctgcaactggaagtcgagcgttaccgcgagcggtcagcacgccacgctgaactcgtgaga
gagtgcgcaaaacgtcacgaagaaaaggatcgactggaacaacgactcgcgacgcagcag
gccatcctgcaacgcgcgccggagatcgagcgtcgagcacaggaactggacgccgtccag
cgcgaactcgacgaactcggtcgcatcgccgcggaacggcagcgtatccagcaggagctc
ctccagcgcgagcgtgacctggaaagcaagcgacgcgaacgtgctgtccgcaagcaagcg
ctcgagacccgcatcaaagagacggagcaggcgctcgctcaacggcccgagctgcaagcg
cgactcgtccagatcgacgaggagcttgctcgactcgccaccctccgggagcggcaagcg
gaactcgacaaccaaaaggtgcaacgcgaagcgcggcgcggtgaattgcgggcgctcgcg
aaccaactgcgccagcagatgaaggaacttcaggaacagttacagcagctgtccgccatc
gacgccgtctgtcccgtgtgtctccgaccgctcacgccggaggaacgcgctcgccaggag
gctcaagtacgcgaacgaggagcgcagcttcggtccaccttcgacgccagccggaatgaa
gaccttcagctcgccaaggagttagaggaaatccagcagcgtcgtcgcgagctcgacgcc
gaattgaggagagagggtgatctccaagccgaaggcggcaagatacgcggtgatctcgaa
aaactcgctcggcaggagcgcgaactggctcagttgcggcgcgaattggagcagctgagt
cgctcggaggagttcgaccccgagtaccgatcactcgcagacgaggtgcagaagctccgg
cagcaattgacagcactcgttttcgatccggaacgccgtgaggcactcgagcgacggcgc
cgcgaactcgagccggttcggcaagaactactgcaactgcgcgacgcgcgaacagctgtg
cagcacctcgccgaacggctgagcgaactcgaacgcgagatcgcgacgctcgagaccgag
cgggtgagtttggaggctgaactggcagcctggtccccgccagaacgagaactggagacc
gtgcacagcgaactcgaacaactgaagcagcgcgaacagagcgaagaagaactgatcgag
cggttgcagtcccagctcggtgctctgcggcagcgattgacggatgcggaggcagcgcag
gatgaggccgagcgcgtttcgcgagaactcgatcgcttggcgcgcgaaatcgccgtactg
gagacactcgaccgcgctttcggtaagcacggaatccagacgatggtcttcgaaaatgtc
ttgccggatctcgccgaggccgcgaacgagattcttgaccgcttgcctggcaatacgctc
cgcatcgacttcgtcactcagcgggacaaaaccagcggggacggcgcgatcgagacgctc
gacatcctgatcagcgacgagttcggccagcgcccatacgagctgtacagtggtggcgag
gcgttccgcatcaacttcgcactgcgcgtggccttgagccttttgctcgtcgagcgagcg
ggccgccgtctggagacattggtcatcgatgaaggtttcggcacacaagacgccaaaggg
cgcgaaggactgattcaagcccttcagtcggtccaggatcgcttcgcgctgattctcgtc
atcacacacctggaggacctcaaggagcaattcccacagcggatcgaggtgtacaagacg
tcgggcgggtcccaggtcaccgtcatccgctga
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