KEGG   Thermomicrobium roseum: trd_1366
Entry
trd_1366          CDS       T00845                                 
Name
(GenBank) transcriptional regulatory protein degU
  KO
K07692  two-component system, NarL family, response regulator DegU
Organism
tro  Thermomicrobium roseum
Pathway
tro02020  Two-component system
tro02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:tro00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    trd_1366
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    trd_1366
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:tro02022]
    trd_1366
Two-component system [BR:tro02022]
 NarL family
  DegS-DegU (multicellular behavior control)
   trd_1366
SSDB
Motif
Pfam: Response_reg GerE HTH_23 HTH_7 HTH_38 Sigma70_r4_2 HTH_40 HTH_29 HTH_28 HTH_24 HTH_VMAP-M9 RepB Peripla_BP_4 wHTH-PRTase_assc HTH_IclR
Other DBs
NCBI-ProteinID: ACM04922
UniProt: B9L2G4
LinkDB
Position
complement(1354928..1355668)
AA seq 246 aa
MNGARSEQSRTSDGQAEREREMGNGRRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAA
NGQDALKMVAELQPDVVLMDINMPGMDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAI
RAGARSYLVKNSKPEELLRAIHVAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDR
ELTMLRLLAQGYNNRQIADALNLAESTVKNNLSALFQKLGVRDRTQAVIYAISHGLVPRP
TDVPRR
NT seq 741 nt   +upstreamnt  +downstreamnt
ttgaatggagcaagaagcgagcagagccggaccagtgatgggcaggcggagcgggagcgc
gagatggggaacggacggcggattcgggtgctgatcgtcgatgaccatgacctctttcgc
gaagggctgcgccagctgatcgagaccgatcctgcgatcgaggtcgtcggtgaagcagcc
aatggtcaggacgcgctgaaaatggtcgccgagctccagccggatgtggtgctcatggac
atcaacatgccggggatggatggcatccgtgcgacggaggcgatcgtccaacaataccga
catgttcatgtcctcatgctgacgatgtacgatgacgaggagtatgtcctccacgcgatt
cgtgccggagcgcgcagttatctcgtcaagaacagcaaaccggaggagttgctccgggcg
attcatgtcgccgccgagggtggtgccacgatcgacccggatctcgccccgatcctgatg
cgcgaataccaacgacttctgacgaaggcgccgactcgagggcaggacctctcggatcgt
gagctgacgatgctgcggctgttggcacagggttacaacaatcgccagatcgcggatgcg
ctcaatttggccgagagcacagtcaaaaacaacctttctgccctgttccaaaagctggga
gtgcgggatcgcacgcaagcggtgatctacgccatctcgcacggcttggttccccggccg
actgacgtgccgcgtcgctga

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