Thermomicrobium roseum: trd_1376
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Entry
trd_1376 CDS
T00845
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tro
Thermomicrobium roseum
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tro03019
]
trd_1376 (rnc)
03009 Ribosome biogenesis [BR:
tro03009
]
trd_1376 (rnc)
03036 Chromosome and associated proteins [BR:
tro03036
]
trd_1376 (rnc)
Enzymes [BR:
tro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
trd_1376 (rnc)
Messenger RNA biogenesis [BR:
tro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
trd_1376 (rnc)
Ribosome biogenesis [BR:
tro03009
]
Eukaryotic type
90S particles
RNase
trd_1376 (rnc)
Prokaryotic type
rRNA processing factors
trd_1376 (rnc)
Chromosome and associated proteins [BR:
tro03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
trd_1376 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DUF6653
Motif
Other DBs
NCBI-ProteinID:
ACM05802
UniProt:
B9L2H4
LinkDB
All DBs
Position
complement(1368235..1368993)
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AA seq
252 aa
AA seq
DB search
MEDQQTNRAQSSGRDERVVQAMEALGIAFRRPDLLRQALTHLSYVYERSRSTQAAVEEAN
ERLEFLGDAVLELLVSEFLYRRFPTASEGELTAYRAALVRTPTLARWARRFRLDEFLYLG
RSEVPRPGRPVRERILAGAFEAVLGALYLDRGIRVVRRFLHRLLLEEAEGLIAIGQNENY
KGRLQELIQDRLRITPVYRTIAVTGPAHQRTFTAEVLIGERPYGVGHGPSKRAAEQEAAR
RALERLRAEGIG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccagcagacgaaccgagcgcagtcgagcgggcgcgacgagcgagtcgtgcag
gcgatggaggccctggggatcgcgttccgtcgaccggacctcctgcgccaggccttgacg
cacctttcgtacgtctacgaacggagccggagcacgcaggccgcggtcgaggaggcgaac
gagcgcttggagtttctcggcgacgcagttctcgaactcttggtgagcgagttcctctac
cggcgctttcccaccgcgagcgagggggaactcaccgcgtaccgcgcggctttggtgcgt
acgccgacgttggcacgctgggcacgccgtttccgactcgacgagttcttgtatctcggt
cgtagcgaggtgccccgaccggggcgaccggtccgcgaacggattctcgcaggagccttc
gaggcggtgctcggtgcgctctacctggatcgtggtattcgggtcgtgcggcggttcctg
caccggctcttgctcgaagaggccgagggactgatcgcgatcggccagaacgagaactac
aagggacggctccaggaactgattcaagaccggttgcggatcacgccggtctatcgcacc
attgcagtgacggggccggcgcaccagcgtacgttcacggcggaagtgctgatcggcgag
cgcccatacggagtgggccacggcccgagcaagcgggcagcggagcaagaggcagcacgg
cgcgcactcgagcggctgcgggcggaggggatcggctga
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