Thermomicrobium roseum: trd_1397
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Entry
trd_1397 CDS
T00845
Name
(GenBank) putative ABC transporter substrate binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
tro
Thermomicrobium roseum
Pathway
tro02010
ABC transporters
tro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
trd_1397
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
trd_1397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tro02000
]
trd_1397
Transporters [BR:
tro02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
trd_1397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ACM04819
UniProt:
B9L2J5
LinkDB
All DBs
Position
1386940..1388376
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AA seq
478 aa
AA seq
DB search
MSRLAHRDDPAMSESVRERVSRFARRRSMERSDFQHLFRRPVRRRTVIVGIGTAALGGLL
AACRGGGATPTPTTAPATPTPAAATPTPAAATPTPAAAATPTVVVTPAAAAEPIRIGLIH
GYTGVFAALAENLTRGIQLAFESIDNTVAGRKVTFVQEDDASNPEQGLTKTKQLVERDKV
HLIIGYIHSGVALACRDYIHQSGVPTIIDNAGAQAITRDPQRRSPYIFRVSFANGQYEWP
MGQYAFEQLGYKRLAFMAPDYAAGHEKAEPVKAAFQKAGGEIAGEVYPPLDTSDFAPFLQ
RIQQAQPDAVWAFFAGADAVRFVTQYQDFGLKDQIPLIGVGDLVDEAYLDQQGDAALDVV
TSLHYSPYIDSPENKAFVDAFKKKYGRVPNQFAYQGYLAALVAAKALEAVQGKVEDTQAF
LKALKGVQFTGPAGPFRFHPETQNVVITVYFRKVQRLPDGTLGNVVLGKRENVDDLSF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgactggcccaccgcgacgatccagcgatgagcgagagtgtgagagaacgggtc
agtcgctttgcgaggaggagatcgatggagcggagcgatttccagcacctattccgtcgg
ccggttcgacggcgaacagtcatcgttgggatcgggacggcagcactcggtggtctgctc
gctgcctgccgtggtggtggtgccacaccgacgccgaccaccgcgccagcgacgccgacc
ccggcagcagccacaccgactccggcagctgcgacaccgacgccggctgcggcagcgact
ccgactgtcgtggtcacaccggctgccgcggcggaaccgatccgcatcggcctcattcac
ggttatacgggtgtctttgcggcattggctgagaatctgacccggggtatccaactcgcc
ttcgagtcgatcgacaacacggtagcgggtcgcaaagtcaccttcgtccaagaagacgac
gcctccaatccggagcagggactcaccaagacgaagcagctggtcgagcgcgacaaggtg
cacctcatcatcgggtacattcacagcggtgtcgcacttgcctgccgcgattacattcac
cagagcggcgtcccgacgatcatcgacaatgcaggagcgcaagcgatcacgcgcgacccg
cagcggcgtagtccgtatatcttccgagtctcgttcgccaatggccaatatgagtggccg
atggggcagtacgccttcgagcaactcggctacaagcgactcgccttcatggctcccgat
tatgccgctggacacgaaaaagcggagccggtcaaggcggcgttccagaaggcaggtggc
gagattgccggtgaggtctatccgccgctcgacacgagcgacttcgcgcccttcctccaa
cggatccagcaagcgcagccggatgcggtttgggccttcttcgctggcgccgacgcggtc
cgcttcgtgacgcagtaccaggacttcgggctcaaagaccagattccgctcatcggcgtt
ggtgacctggtcgacgaggcctatctcgatcagcaaggggatgcagcgctcgacgtcgtg
acgtcactccattactcaccgtacatcgattcaccggagaacaaggcttttgtcgacgcc
ttcaaaaagaagtatgggcgcgttcccaaccagttcgcctaccaaggttacttggctgcg
ctcgtcgcagcgaaagcactcgaggcggtacagggcaaggtcgaagacacgcaagcattc
ctcaaggcgctcaagggcgttcagttcacgggaccagccggtccattccgcttccatccg
gaaacgcagaatgtcgtcatcactgtctatttccggaaggtccagcgcctgccggatggc
acgctcggtaatgtcgtgctcggcaagcgcgagaacgtggacgacctctcgttctag
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integrated database retrieval system
