Thermomicrobium roseum: trd_1511
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Entry
trd_1511 CDS
T00845
Name
(GenBank) putative 3-methyladenine DNA glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
tro
Thermomicrobium roseum
Pathway
tro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
trd_1511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tro03400
]
trd_1511
Enzymes [BR:
tro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
trd_1511
DNA repair and recombination proteins [BR:
tro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
trd_1511
Prokaryotic type
trd_1511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
ACM05412
UniProt:
B9KZP1
LinkDB
All DBs
Position
complement(1491306..1491971)
Genome browser
AA seq
221 aa
AA seq
DB search
MDGVGTIVDTSEIQLDPARALPRDWFARPAVEVARDLLGAILVSMVGGELVAGVLVEVEA
YGGPEDPASHAARYRNGPARVMWGPPGHAYVYRAYGVYPCCNIVTDPDGTAGAVLLRAAM
PLAGHAIMRQRRERSRHAGYRLAEHRLASGPGALAQAFGIMLDHHGLPIDRPPFWIQSGS
SPQRVASTPRIGISRGQEFLWRFVIPGHPAVSGRTPRLVTE
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgtcggaaccattgtcgacacaagcgagatccaattggatccggcacgagcc
ttaccgcgtgactggttcgcgcgtccggcggtcgaggtcgctcgcgatctcctcggcgca
atcctggtgagcatggtcggcggcgagttggtcgctggagtgctcgtcgaggtcgaggcc
tatggcgggccggaggaccctgcttcgcacgcggcccgctaccggaacggaccggctcgg
gtcatgtggggaccaccgggccatgcctacgtctatcgggcctatggcgtttacccatgc
tgcaacatcgtcaccgatccggacggtacagccggagctgtcttgctccgtgccgccatg
ccgctggctggccacgcgatcatgcggcaacgccgggagcgatcgcgtcacgccggatac
cgattggctgagcaccggctggcgagcgggccgggagcgctcgctcaggcgttcgggatt
atgctcgatcatcacgggttgccgatcgatcgaccgccgttctggattcagtctggctca
tcgccgcagcgtgtcgcgagcacgccacgcatcgggatctcgcgcggtcaggagttcctg
tggcggttcgtgattcccggacatccggcagtctctgggcgtactccgcgcctcgtgacg
gagtag
DBGET
integrated database retrieval system
