Thermomicrobium roseum: trd_1559
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Entry
trd_1559 CDS
T00845
Name
(GenBank) c-di-GMP phosphodiesterase A
Organism
tro
Thermomicrobium roseum
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
PAS
GGDEF
PAS_8
PAS_9
PAS_4
PAS_3
GAF
GAF_2
GAF_3
Motif
Other DBs
NCBI-ProteinID:
ACM06164
UniProt:
B9L066
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All DBs
Position
1540072..1543098
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AA seq
1008 aa
AA seq
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MNEDIERGSEKGSGPTLATHRPAGDSSDIPELVAALWNSSEPQLLIDPQDGRIVDANDAA
VRFYGWTYGVLCSFTIDRINTLPPAEIRARLAEATQRPRTRFVFPHRFADGRVRSVEVIT
GPVRVGERILLWSTLHDLSDIVHRSPEFETLAHRYQTLVENLPAVVYLEEADPPHRKIYV
SPAAERLLGWAAHELQVDRATWYERFVAPEDRAWALAERERNDRTGEALRLVYRFRTGDG
RTVWLRDEAVLIRDRLGHPWARHGLLTDVTSQKRLEARLQRELAFHNVLLGIASRLVTAS
SDEFENVVAATLADLGSFLAIDHLVLLECEGTDIVLLSRWQAPGIELSVRCLGRQAIPSL
PSLQSLLERGQPVVVPRLEALDAGADDVRTFCTHLGLRSLLAVPLLAAGRLIGCLLAAQQ
RDERLWGEEELDLFTLVSQLYAASIQQRRAERAEAQHHAWLRATVLAAPDALLVLDANGI
VRFASPAARTVLGLAPDQLVGRPLADLTTTPERVASWALDGLRPERANRIEVQFAHQPTR
TVELSGVDLRSDRHIAGIVLSARDVTERKRAEQLLRERATRDQLTGLLSRFGFLEVLEAL
LHTTTAETIGILCCDLERFSALNDALSWEAGDAILRAVAERIRRVTGALAAARLEADRFA
VALTAPDRTTLVRLAEELLHELSGWYEVGRDEVYARMRGGLACVEDGIDATTALRRAEIA
FQVGKRAGQERLSVFDPVLYQASIERQFLERDLRRALEQGELQIHYQPVIAVSSGRLTSL
EALVRWHHPDRGPISPAVFVPLAETTGLISQLTQWVLLQACRQLWAWSRAGLAPELSISV
NLSPTDFLHLDVPQLVDDILQVTGLEPRRLTLELTESAMLDPAVSRERLERLRALGIAVL
IDDFGAGYSSLGYLKQLPVSGLKIDRTLVADIDHDPASTAVVRSILELAGALELSVTAEG
IESARQLAVLRELGCHYAQGFFVGRPAPPNAIHHLLRRGSTDHPYLDE
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaggatatcgaacgggggtcggagaaagggtccggcccgacactcgctacgcac
cggcctgccggggacagctcggacattccggaactcgtcgcagcgctctggaacagtagc
gagccgcagctgctgatcgacccgcaggacgggcgtatcgtcgacgccaacgatgccgcc
gtgcgcttttacgggtggacctacggcgtcctgtgctcgttcaccatcgatcgcatcaac
acccttccgcctgctgagatccgagcacgactcgccgaggccacccaacgccctcgcacg
cgtttcgtttttccccaccgatttgcggatgggcgcgtgcgctcggtcgaagtgatcacc
ggaccggtacgcgtcggcgagcgcatcctcctctggtcgactctccacgacctgagcgac
atcgtccatcgttccccggaattcgagacgctcgcgcaccgctatcagacactggtcgaa
aacctcccagctgtggtctatctggaggaggccgatccacctcaccgtaagatctacgtg
agtccggcggctgagcgactcctcggttgggccgcgcacgaactccaggtcgatcgagcg
acctggtacgagcggttcgtcgcaccggaggatcgcgcttgggcgctcgctgagcgagag
cgaaacgatcgtaccggtgaagccttgcgcctggtgtaccggttccgcactggcgatggt
cgaacggtttggctccgcgacgaggcggtcctcatccgcgaccggctgggacacccctgg
gctcggcacgggctcctgaccgacgtgaccagtcagaagcgcctcgaggcccgcctgcaa
cgggaactcgcttttcacaacgtcctgctcggaatcgccagtcgcctggtgacagcgagc
agcgacgagttcgagaacgtcgtggccgcgacgttagccgatctgggatcgttcctggcg
atcgatcatctcgtgcttttggagtgcgaaggaacggacatcgtgctcctgagccggtgg
caggctcccggcatcgagttatcggtacggtgtctcggccggcaagcgattccgagcctt
ccctcgctccagtcgctgctcgagcgcggccaaccggtcgtcgtaccgcgtctcgaagcg
ctcgacgcgggggccgacgatgtgcggacgttctgcacgcacctcggcctgcgatcgctc
cttgcagttccgctcctggcagctgggcgcctgatcggctgtctcctcgccgctcagcaa
cgtgacgagcggctgtggggtgaggaggagctggatctcttcacgctcgttagccaactc
tacgcggcatcgatccagcagcggcgggcagaacgagcggaggctcagcatcacgcctgg
ctccgtgcgacggttctcgctgcgccggacgccctgctcgttctcgacgccaacggtatc
gttcgcttcgcctcgcccgcggcccggactgtcctcgggctggcaccggaccagctggtc
ggtcgcccgctcgcggatctgacgaccactccggagcgagtcgccagctgggcactcgac
ggactgcgacccgagcgagcgaaccgcatcgaagtccagttcgcgcaccagccgacgcgc
acggtcgaactctcgggtgtcgatctccgcagcgaccggcacatcgcgggaatcgtgctg
tctgcccgcgatgtcaccgagcgcaagcgagccgagcagctgctccgcgagcgggcgaca
cgcgaccagctgaccggactcctgagccgcttcggatttctcgaagtgctcgaagcgctc
ctccacacgaccaccgcagaaacgatcggcatcctctgctgtgatctcgagcgcttttcg
gcattgaacgatgcgctgagctgggaagcgggtgatgccatcctccgcgcggtcgccgag
cggatccgccgagtaaccggcgcgctggccgctgctcgcctggaggccgaccggttcgcg
gtcgcgctgaccgctcccgaccggacgacgctcgtccgactcgccgaggaactcttgcac
gaactcagcggctggtacgaggtgggtcgtgacgaagtctacgcccgcatgcgcggcggg
ctggcttgcgtggaagatggaatcgacgcgaccaccgcgctccgtcgggcggaaatcgcc
ttccaggtcggcaagcgcgccggtcaggagcgtttgtccgttttcgatccggtgctctac
caggccagcatcgaacgacagttcctggagcgcgacctgcggcgcgcgctggaacagggg
gaactccagatccattatcagccagtcatcgccgtctcgagcggtcgcttgaccagtttg
gaagcactggtccgttggcaccatcccgatcgtggccccatctctcccgccgttttcgtc
cccttggccgagacgaccggattgatcagccagctgacccagtgggtgctcctgcaggcc
tgccgtcaactctgggcctggtctcgggccggactggctccagaactttcgatcagcgtc
aacctgagccccaccgacttcctgcacttggacgtaccgcagctcgtcgacgacatcctg
caggtgaccggcctggagccgcgacggctgacgctcgagctgaccgagtcggcgatgctc
gacccggccgtctcgcgcgagcgactcgagcgtttgcgggcgctcggcatcgcggtgttg
atcgacgacttcggtgcggggtactcctcgctcggctacctcaagcagttaccggtgagc
gggctcaagatcgatcgcaccctggtggccgatatcgatcatgatccggcgagcacagct
gtcgtccgctcgattctggagttggccggcgctctcgagttgagcgtcacggcggaaggg
atcgaatcggcacgccaactcgctgtcctgcgcgagctcggttgccattacgcacaggga
ttcttcgtcggtcggcctgctccgccgaatgcgatccaccatctcttgcgccgtggctcc
accgaccacccctatctggacgagtga
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