Thermomicrobium roseum: trd_1668
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Entry
trd_1668 CDS
T00845
Symbol
hexB
Name
(GenBank) DNA mismatch repair protein HexB
KO
K03572
DNA mismatch repair protein MutL
Organism
tro
Thermomicrobium roseum
Pathway
tro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
trd_1668 (hexB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tro03400
]
trd_1668 (hexB)
DNA repair and recombination proteins [BR:
tro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Molecular matchmaker
trd_1668 (hexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ACM05459
UniProt:
B9L0H4
LinkDB
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Position
complement(1666564..1668291)
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AA seq
575 aa
AA seq
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MPIVRLDEATVRRIAAGEVVERPASVVKELVENALDAEARTIRVEIVAGGRELIRVQDDG
TGIPPDELPLAVERHATSKLHRFEDLARLASYGFRGEALAAISAVSECEIVSRVPDAPYG
ARLLVRYGRPGRVEPIGAAPGTVVTVRDLFANVPARRRFLRQDATEAALIQRTLAALALA
RPEVRFELTNDGRTVLATGGSGDLLDALIGVYGAETATQMLRLEEYCAGEIVVQGAVGLP
RVSRPNRQALFVLVNQRWVESRTLVAAIEQAYHTLLMVGRYPIGVVAVSLPGDRVDVNVH
PTKREVRFADERAVAAAVYEAVRRTLLAHVPENPPPPVTFSPLSPSVVQRRLQVADPTRE
LSSSRPGTPEELVDAPSSTRSADSANWLPVLRVLGQVRQAYIIAEGPDGMYLIDQHAAHE
RILLDRLLAQLEARGVEQQALLEPLVLELSPVQLATVERYRDALVQLGWELEPFGGAAVA
VRAVPAVVQRSIEQVLIAVLDDLAAGGRGTTPLERVAISTACHSAIRAGQELSLPEMREL
IRQLEQCRVPNACAHGRPTVVHLSTEELERQFSRR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcgtccggctggacgaggcgaccgttcgacggatcgctgccggtgaagtcgtc
gagcgaccggcatcggtcgtcaaggagctcgttgagaatgcgttggatgcggaggctcgg
acgatccgcgtcgagatcgtcgcgggtggccgagagttgatccgtgtccaggatgacggg
acggggattccaccggacgagctgccgctggccgtcgagcggcatgctacctccaaactg
caccgcttcgaggacttggcgaggctcgcgagctatggcttccgcggcgaggccctggcg
gcgatcagcgcggtcagcgagtgcgagatcgtctcgcgggtaccggatgctccctatgga
gcgcggttgctcgttcgttacggacgccccgggcgggtcgagccgatcggggctgcgccg
ggaaccgtggtgaccgttcgcgatctcttcgccaatgtcccggctagacggcgtttcttg
cgccaggatgcgaccgaggctgccctcatccaacggacgctcgctgcgctcgctctggct
cgtccggaggtccggttcgaactcacgaacgacggacgaacggtgctggcgaccggcggg
agcggtgatctcctcgatgcgctgatcggagtgtatggagccgagacggcgacgcagatg
ctccggctcgaggagtactgtgcgggcgagatcgtggtccagggggcagtcggtctaccc
cgcgtgtctcgtcccaaccggcaagcgctgttcgtgctggtcaatcagcgttgggtggag
agccgcaccctggtggcagcgatcgaacaggcctatcacaccttgttgatggtcggacgc
tacccgatcggggtcgtggcggtgtcgctgcctggggatcgggtcgacgtcaatgtgcac
ccgactaagcgcgaagtgcgtttcgccgacgagcgagcggtggccgctgcggtgtacgag
gcagtccgccgcaccctcttggctcacgtgccggaaaacccgccgccaccggtgacgttc
agcccgctttcgccgtcagtcgtgcaacgtcgcctccaggtcgctgatccgacgcgggaa
ctcagcagcagccgccctggcacgcccgaagaactggtcgatgccccatcgagcactcgc
tcggccgactcggcgaactggctgccggtcctgcgcgtgttggggcaagttcggcaagcc
tacatcatcgccgaggggccggacggcatgtatctgatcgaccagcatgccgcccatgag
cggatcctgctggatcggttgctcgcgcagctggaggcacgtggtgtcgagcagcaagcg
ctcttggagccgctggtgctcgagctttctcccgtgcaactggccaccgtcgagcgctac
cgtgacgcgctggtccagctcggctgggaactcgagcccttcggtggggctgcggtcgct
gtccgggcggttccggcagtggtccaacgcagcatcgagcaggtcctgatcgccgtgctc
gacgacctcgcagcgggtgggcgcggcacgaccccgctcgagcgcgtggccatcagcaca
gcctgtcactcagcgatccgggcgggacaggaactctcgcttcccgagatgcgcgaactc
attcgccaactcgagcagtgccgcgtccccaacgcctgcgcgcatgggcgcccgacggtg
gttcatctgagcaccgaggaactggagcggcaattcagccggcgctag
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