Thermomicrobium roseum: trd_1878
Help
Entry
trd_1878 CDS
T00845
Name
(GenBank) nickel-dependent hydrogenase, small subunit
KO
K06282
hydrogenase small subunit [EC:
1.12.99.6
]
Organism
tro
Thermomicrobium roseum
Pathway
tro01120
Microbial metabolism in diverse environments
tro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
trd_1878
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
trd_1878
Enzymes [BR:
tro01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
trd_1878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NiFe_hyd_SSU_C
Oxidored_q6
Motif
Other DBs
NCBI-ProteinID:
ACM06203
UniProt:
B9L1X8
LinkDB
All DBs
Position
complement(1887363..1888403)
Genome browser
AA seq
346 aa
AA seq
DB search
MTARMTESVPEVHILWINAGLSCDGDSVALTAATQPTIEEIALGALPGLPRVHLHWPLID
YATGEDFLSWFFRAERGELEPFILVVEGSIPNEAVKREGYWCGFGNDPATGQPITTSEWL
DRLAPKAWAVVAAGTCATYGGIHAMAGNPTGAMGVPDYLGWNWRSKAGIPVVCVPGCPIH
PDNMAETLLYLLYQAAGRAPMIPLDEALRPKWLFGATVHQGCDRAGYYEEGDFATEYGSP
KCLVKLGCWGPVVKCNVPKRGWINGIGGCPNVGGICIACTMPGFPDKFMPFMDAPPGSVV
SGTLSQVYGTVIRGLRQITLQTVDKEPKWRRKGSELATGYEKTRYD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccgcatgacggaaagtgtgccggaggttcacattctctggatcaacgccggg
ctgagttgcgacggtgactccgtggccctcacagcggcgacccagccgacgatcgaggag
atcgcgcttggtgccctgcccgggttgccacgcgtgcatctccactggcctctgatcgac
tacgcaacgggcgaggacttcctctcctggttcttccgggccgagcgcggcgagctcgag
cccttcatcctcgtcgtggaaggctccattcccaacgaggcagtgaagcgcgagggatac
tggtgcggcttcggcaatgaccccgccaccggacaaccgatcacgacgagcgagtggctc
gaccggctggcaccgaaggcctgggcggtcgtggccgctgggacctgcgcgacctatggc
ggcatccacgccatggccggcaacccgaccggagcgatgggcgtccccgactatctcggc
tggaactggcgctccaaggctggcatcccggtcgtctgtgtgccgggatgcccgatccac
cctgacaacatggccgagacgctcctctatctcctctaccaagcagctggacgcgctccc
atgatcccgctcgacgaggcactccgtcccaagtggctcttcggcgcgacggtccaccag
ggctgtgaccgagcgggttactacgaggaaggagacttcgccaccgagtatggctcgccg
aagtgcctggtgaagctcggctgttggggtccggtggtgaagtgcaacgtgccgaagcgt
ggctggatcaacgggatcgggggttgtccgaacgtgggcggtatctgcatcgcctgcacc
atgccggggttccccgacaagttcatgcccttcatggatgccccaccgggtagcgtcgtg
tccgggacgctgagccaagtctacggtaccgtgatccgcggtctccggcagatcacctta
cagaccgtcgataaggagccgaagtggcgccgcaaggggagcgagctggccaccgggtac
gagaagactcgctatgactag
DBGET
integrated database retrieval system
