Thermomicrobium roseum: trd_1897
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Entry
trd_1897 CDS
T00845
Name
(GenBank) BNR/Asp-box repeat domain protein
Organism
tro
Thermomicrobium roseum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
BNR
BNR_2
PSII_BNR
BNR_6
Motif
Other DBs
NCBI-ProteinID:
ACM05768
UniProt:
B9L1Z7
LinkDB
All DBs
Position
complement(1906071..1909175)
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AA seq
1034 aa
AA seq
DB search
MAGHPEDPMVFYFGACAGGVWKTEDGGTTWWNVSDGFFQTAAVGAIAIASSDPNVLYVGT
GEACIRGNVSHGDGVYKSTDGGRTWVNVGLRDTRHIAKIRVHPHDPDLVYVAALGHAFGP
NEERGVFRSRDGGRTWERVLYRDAETGAIDLVMDPHNPRILYAALWQARRWPWKLVSGGP
GSGIFRSTDGGETWEELTRKPGLPKGIIGRVGLAVSAKPGRLWALVEAEDGALFRSEDYG
ETWERVSDKGDLRWRAWYFHHLCADPVDPDTLWVLDLKLWKSIDGGKTFSEVPTPHGDHH
DHWIDPKNPLRMINGNDGGACVSFDGGRTWSTQFNQPTAQLYHVTVDNRFPYWVYGSQQD
NTAIALPSRSVNGAITTCEWEEPGGGESGHIAVKPDDPAIVIGGAIGSGEGNGRLIRYNR
RTGEQRNITVWPYETSMAEGAESLRYRFQWTFPILFSPHDPNTLYVCSQVVHRSRDLGYT
WEVISPDLTRNDPEKLAPSGGPITRDNTGAEVYCTIFAFVESPHQPGVFWAGTDDGLVHV
SRDGGVTWENVTPPELPEWATVASLEVSPHDPETVYLAAHRYRLDDPAPYLFVTRDGGKT
WHSLRADLPEETICRVLRVDPAKPGLLYLGTETGLWISLDDGQHWHRWQGNLPICPIYDL
VVKDDDLVVATHGRSFWILDDVTPLRQFDPARLDGPASLFAPRPTIRFKTYPGYGSEVPN
TVSYRWAGPIVYAAWVTEQPTGVKEARPLDAGQNPPDGAIITYYLSEEPAEVTLSILDAD
GRELRRFSSEKPVDPLPDVPDEKKPSLPPRLAKTPGFHRFVWDLRIEGARRAIGDKPYEG
YLVGPRVVPGTYQVRLTVGDRNWTQPLEIRPDPRLSVTREDLVRQYELLVRIRDKVSEAH
DAINRLRDTRRQLLEWRDRLEASGAAADLVDDVRRMIERLGALVDELLEPRMDDPRQFPP
RAPARLAILQSFVDSADDRPTAGEEEVYRLLAXEIDAVLTRVQKVFDEELPALSQRLLQA
GANPIVPRSVLARP
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
gtggccgggcaccccgaggacccgatggtcttttatttcggtgcctgtgccggaggcgtc
tggaagaccgaggacggggggacgacctggtggaacgtctcggatggcttcttccagacg
gctgcggtcggtgccatcgcgatcgcgtcgtccgatccgaacgtgctctacgtcgggact
ggtgaagcctgcatccgcggcaatgtctcgcacggggacggcgtctacaagtcgaccgac
ggcggacgcacctgggtcaacgtcggcttgcgcgatacccggcatatcgccaagatccgc
gtccatccacacgatcctgacctcgtctacgtggcggcgctcggccacgcgttcggcccc
aacgaggagcgcggcgtcttccgcagccgcgacggtgggcgaacctgggagcgcgtcctg
tatcgggacgccgagactggggccatcgacctggtcatggacccgcacaatccacgcatc
ctctacgcagcgctctggcaggcacgccgctggccctggaagctggtgagcggtggtccc
ggctccggcatcttccgctccaccgacggtggagagacgtgggaagaactgacccgcaag
cctggactccccaaggggatcatcgggcgcgtgggactggctgtctccgccaagccggga
cggctctgggccctcgtcgaggccgaggatggggcgctcttccgctccgaggactacggc
gagacctgggagcgagtgagcgacaagggtgacctccgctggcgcgcctggtacttccat
catctctgcgccgatccggtcgatcccgacacgctctgggtgctcgatctcaaactctgg
aagtcgatcgacggtgggaagaccttcagcgaggttccgacaccgcacggtgaccaccat
gatcactggatcgatcccaagaatccactgcgcatgatcaacggtaacgacgggggcgcg
tgcgtcagtttcgacggcggtcgcacctggtcgacccagttcaaccagccgacggcccag
ctctaccacgtgaccgtcgacaaccgcttcccctactgggtctatggttcccagcaggac
aatacggcgatcgccttgcccagccgctcagtcaacggagccatcaccacctgcgaatgg
gaagaaccgggaggcggcgagagcgggcacatcgcggtcaagccggacgaccccgcgatc
gtgatcggtggagcgatcgggagcggcgaggggaatgggaggttgatccgctacaaccgg
cggaccggcgagcagcgcaacatcacggtctggccctacgagacgagcatggcggaggga
gcggaatcgctccgctaccgcttccagtggaccttcccgatcctcttctcgccgcacgat
cccaacacgctctacgtctgctcgcaggtcgtgcaccgctcgcgcgatctcggctacacc
tgggaagtgatcagccctgacctcacgcggaacgatccggagaaactcgcgccatctggt
ggaccgatcacgcgcgacaacaccggggccgaggtctactgcacgatcttcgccttcgtc
gaatcgccccatcagcctggtgtcttctgggctggcaccgatgatggcctcgtgcacgtc
tctcgtgacggcggcgtgacctgggagaacgtcaccccaccggagcttcccgagtgggcc
acagtcgcgtcgctcgaggtctcgccgcacgacccggagacggtctacctggctgctcac
cgctaccgactcgatgatccagccccctacctcttcgtcacgcgcgacggcggcaagacc
tggcactcgctgcgcgctgatcttccggaggagacgatctgccgcgtgctccgcgtcgat
ccagccaagccggggctcttgtacctcggtaccgagaccgggctctggatctcgctcgac
gacggccagcactggcaccgctggcaggggaaccttccgatctgccccatctacgatctc
gtcgtaaaggacgatgatctggtcgtcgcgacgcacggtcggagcttctggatcctggac
gacgtgacgccgctgcgccaattcgatccggcccgtctggacggaccggcctctctcttc
gctccgcgtccgaccatccgcttcaagacctatcccggatacggcagcgaagtacccaac
actgtgagctaccgctgggccggaccgatcgtctatgcggcctgggtcaccgaacaaccg
accggtgtcaaggaggcgcgaccgctcgacgctggtcagaatccgccggacggcgcgatc
atcacctactacctctctgaagaaccagccgaggtgacgctgagcatcctggatgcggat
ggccgcgagctgcggcgcttttccagcgagaagccggtcgatccactacccgatgtgccg
gacgagaagaagccatcccttcccccgcgcctcgccaagactcctggcttccaccgcttc
gtttgggacctccgcatcgaaggtgcccgtcgggccatcggcgacaaaccctacgagggg
tacctggtcggcccgcgcgtggtgcccggtacctaccaggttcgcctgaccgtgggcgac
cggaactggacgcaaccgctcgagatccggcccgatccgcgcctctcggtcacccgcgag
gacctcgtccggcagtacgaactgctcgtgcgtatccgcgacaaggtctcggaagcacac
gatgccatcaaccgcctgcgcgatacccggcgccagctcctggagtggcgtgaccgcttg
gaagcgagcggcgctgcggccgatctcgtggacgacgtgcggcgcatgatcgagcgcctc
ggggcgctcgtcgatgaactcttggagccgcgcatggacgacccgcgccagttcccgccg
cgcgctccggctcggctggcgatcttgcagagcttcgtcgatagcgcggacgatcgcccg
acagcaggtgaggaggaggtctatcgcctgctcgccsccgagatcgatgctgttctgaca
cgcgttcagaaggtcttcgacgaagaactcccagcgctcagccagcggctcctccaggct
ggggcgaacccgatcgtgccacgcagcgtgctcgcccggccgtaa
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