Thermomicrobium roseum: trd_1927
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Entry
trd_1927 CDS
T00845
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tro
Thermomicrobium roseum
Pathway
tro00550
Peptidoglycan biosynthesis
tro01100
Metabolic pathways
tro01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
trd_1927
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
trd_1927
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tro01011
]
trd_1927
Enzymes [BR:
tro01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
trd_1927
Peptidoglycan biosynthesis and degradation proteins [BR:
tro01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
trd_1927
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
ACM05798
UniProt:
B9L227
LinkDB
All DBs
Position
complement(1936420..1938696)
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AA seq
758 aa
AA seq
DB search
MRTRPARRGLDLPAPKSIAPPEEPEPTRDERMTRRVFLLRGAMVLGFGAVLAKLGIMQLR
ERPRYQAAAQGSMVRFEPLRAPRGLIVDRNGTVLARNRRSWTVWLVPAELPDDEATYRQV
RDQIVAALGLDDVLVVHRPALPPGEERAVLDALGTVLGVPGADLAGLVFSAPKDRKYVIV
RDKLRPEEAAALRQEAKRLPGVHVLNRFDYLAQSAAGSAVPVVLADDIPRELALTLAANP
AALPGIHVSDDKLVREYPAGPEFAHILGYVGPITKEEYDAAGGDSPANPYRPDDRVGRGG
VEQAMEPALRGQHGGRWVQVDARNVIVGELVERRREPVPGLTVVLTIDSTLQKAVTAALA
EGIRAADRAAREKGRDPVGSGVAIVLDPRSGEVLALVSLPTYDNQKFVHGLSQAEYQALL
DDPFHPLVNYAISGEFPPGSTVKPLLACAGLQEGVITLASTFTCRGAIRVPTVWDEAGGN
TYVCWLASGHGEVDVLDGIAQSCNVFFYNVGAPGQTPEGGSEPLHYYIPGDPAKHYFVGL
GIERIEQYLRQVFGFGQPTGIELAGEADGLVPNPRWLFQTLREYWSVGDTINVSIGQGHL
ACTPLQLACALAAIANGGTYYRPRIVRELRDASGQVVRRFEPEAARQLAIAPEHLETVRR
GMRRTVTDGTAKGKFVLTGDDIPIAGKTGTAEYGEAENGRYKKAHAWFTAFAPYDDPAVL
VLVLIRDGGEGATFAVPVADRILATYFGRISPETGARG
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcactaggccggcccggcgcggactcgatcttcccgcgccgaagtcgatcgcgcca
ccagaagaaccggaaccgacgcgcgacgagcggatgacgcgacgggtgttcctgctgcgc
ggcgcgatggtgctcggcttcggcgcagtcctggccaagctcggcatcatgcagctgcgc
gagcgcccacgctaccaggcagccgctcagggcagcatggtgcgcttcgaacccttgcgc
gccccgcgcggactgatcgtcgatcgcaacggcaccgtgctcgcccggaaccgacggagc
tggaccgtgtggctggtccccgccgaactccccgacgacgaggcaacgtaccggcaggtg
cgggaccagatcgtcgccgctctgggactggacgatgtcctagtcgtgcaccggccagcg
ctgccacccggcgaggagcgggcggttctcgacgcactcggcacggtgctcggtgtgccc
ggagctgacctggcagggctggttttttccgcccccaaggaccgcaagtacgtcatcgtg
cgcgacaagctccgaccggaagaagccgcagccctgcgccaggaagccaagcgcctccca
ggggtgcatgtcctcaaccggttcgattacctggcgcagtcggcagcggggagcgccgta
ccggtcgtgctcgccgacgacatcccgcgcgaactcgcactcacgctggcagcgaacccg
gctgctctccccgggatccacgtgagcgacgacaagctcgtccgcgagtacccggcgggg
ccggagttcgcgcacatcctgggctacgtcgggccaatcaccaaggaagaatacgacgca
gcgggcggcgacagtccggccaatccgtatcgtcccgatgaccgcgtcgggcgtggcgga
gtcgagcaagcgatggaacccgccctgcgcggtcagcacgggggacgctgggtgcaggtc
gatgcccgcaacgtgatcgtcggtgaactggtcgagcgacggcgcgagccggtcccggga
ctcaccgtggtgctgaccatcgactcgaccctgcaaaaggccgtcaccgcggcgctggcc
gaagggatccgcgctgccgatcgcgctgcccgcgaaaaaggacgcgatccggtcgggtcc
ggcgtggccatcgtgctcgatccgcgctcgggcgaggtcctggcactggtctccctgccg
acctatgacaatcaaaagttcgtgcatggcctgagccaggcagaataccaggcgctcctc
gacgaccccttccacccgctggtcaactatgcgatcagcggcgagttcccgcccggctcc
accgtcaagccgcttctcgcctgcgcggggctgcaggaaggggtcatcacgctggcgagc
accttcacctgccggggagcgatccgcgtgccgactgtctgggacgaggcaggcggcaac
acctacgtctgctggctggccagcgggcacggtgaggtcgacgtcctcgacgggatcgcc
caatcctgcaacgtgttcttctacaacgtcggggcgcccggccaaacgccggaaggtggc
agcgagccgctccattactacatccccggtgacccggccaagcactacttcgtcggactg
gggatcgagcggatcgagcagtacttgcgccaggtgttcggcttcgggcaaccgaccggt
atcgagctcgccggcgaagccgacggcctggtgccgaacccgcgctggctgttccagacg
ttgcgggagtactggtcggtcggagatactataaacgtctccatcggccagggacacctg
gcctgcacgccgttgcagctggcctgtgccttggctgccatcgccaatggggggacctac
tatcggccgcggatcgtccgcgaactgcgcgacgcgagtgggcaggtggtccggcggttc
gagccggaagcggcgcgtcagctggcgatcgcgcccgagcatctcgagacggtccgccgc
ggcatgcgccgcaccgtcaccgatgggacggcgaaaggaaagttcgtgctgacgggagac
gacatcccgatcgccggcaagacggggacagccgagtacggcgaggcggagaacgggcgc
tacaagaaggcgcatgcctggttcaccgccttcgctccctacgacgacccagcggtgctg
gtgctcgtcctgatccgcgatgggggagagggcgcgaccttcgctgtcccggtcgctgac
cggatcctggcgacctacttcggacggatcagcccggaaacaggagcgagagggtag
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