Thermomicrobium roseum: trd_1954
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Entry
trd_1954 CDS
T00845
Name
(GenBank) putative oligopeptide transport atp-binding abc transporter protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
tro
Thermomicrobium roseum
Pathway
tro02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
trd_1954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tro02000
]
trd_1954
Transporters [BR:
tro02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
trd_1954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_29
SMC_N
AAA_16
TniB
Abhydrolase_6
ABC_ATPase
DUF3987
DUF87
AAA_18
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
ACM05447
UniProt:
B9L2R1
LinkDB
All DBs
Position
1971853..1973100
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AA seq
415 aa
AA seq
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MGARGARHAASRAETPATPTRRPRKARRDVRCVNGLSIAVLLLEASDRSSPDTRGRRKRA
CHCLQHIGTLIASLADKVTSVKVKRAARNGDAMRPILEVKDLTVYYHTPAGPVRAVEGVT
FSVHPQEWFGIVGESGSGKSTVALALLRLIKPPGRIERGQIVLDGRDLLAFDEEDMRNYR
LAQIALVAQGAMNSLNPVKRVRDHFLLALRDHGVQLGEQEYDRIIATLLKRVGLRPEVAH
LYPHELSGGMKQRVCIALAISLEPKVLVADEPTSALDVVVQWQVMETLRAVQREIGAAVI
LIGHDMGLIAQTVDRIAVMYAGRLVEVGPTREILTEPLHPYTRALIASLPSLDGRGELRG
IAGLPPSLLNPPAGCAFHPRCPVAIDRCRMERPLLREVRPRRWVACHLVENGGTT
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgggggcacggggagcgcgacacgcggcaagcagagccgagactccagcgacaccaacg
aggcgaccgagaaaggcgcggcgagacgtccgctgcgtcaatgggttatccatcgcggtc
ctcctcctcgaagcatccgaccgctcgtcgccagacactagagggcggagaaaacgagct
tgtcattgcctacagcacattggtaccctcatagcaagtctagctgacaaggtgacaagc
gtcaaggtgaagcgagcagcaaggaacggtgacgcgatgcgtccgattttggaagtcaaa
gacctcaccgtatactaccatacccctgctggtccagtacgtgcagttgaaggagtaaca
ttttctgttcatcctcaagaatggttcgggatcgttggggagtcaggtagtggaaagtca
acagtagcacttgcgctattgcggttaataaagcctcctggacgaatcgaacgtggtcag
atcgtcttggatggcagagatcttctggccttcgacgaagaggacatgcggaactatcgt
cttgcgcagatcgctctggtggcccaaggggcgatgaactccctcaatccggtgaaacgg
gtgcgcgatcactttctcctcgcgttacgggaccatggggtgcagcttggtgagcaggag
tacgaccgcatcatcgcgacgctgcttaagcgggttggccttcgccccgaggtggcgcat
ctctacccccacgagctgagcggtggcatgaagcagcgggtctgcattgctctggctatc
agtttggagccgaaggtgctcgttgctgacgagccgaccagcgcgctcgatgtggtggtg
caatggcaagtgatggagacgctgcgtgccgtccagcgcgagatcggcgcagcggtgatt
ctgatcggccatgatatggggttgatcgcgcagacggtagatcgcattgcggtcatgtat
gctggacgactcgtcgaggttggcccgacgcgcgagattttgacagaacctttgcacccc
tatacgcgggctctcattgctagcttgccatcgctcgacgggcgtggagagttgcgcggg
attgccggtcttccaccgtcattgctcaacccgccagcggggtgcgctttccatccacgc
tgcccggtcgcgatcgaccggtgccggatggaacgcccgctcctccgtgaggtgcgccca
aggcggtgggtcgcgtgccacctggtcgaaaacggagggacgacatga
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