Thermomicrobium roseum: trd_1974
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Entry
trd_1974 CDS
T00845
Name
(GenBank) formate dehydrogenase, nitrate-inducible, major subunit (selenocysteine-containing)
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
tro
Thermomicrobium roseum
Pathway
tro00630
Glyoxylate and dicarboxylate metabolism
tro00680
Methane metabolism
tro01100
Metabolic pathways
tro01120
Microbial metabolism in diverse environments
tro01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
trd_1974
09102 Energy metabolism
00680 Methane metabolism
trd_1974
Enzymes [BR:
tro01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
trd_1974
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Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
ACM05173
UniProt:
B9L2T1
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Position
complement(1991369..1994551)
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AA seq
1060 aa
AA seq
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MAAGAPTLRLSWTRDSGLRPSAGKESGGRAFMRLLQQLRQHVGFVPNPVSETTRQAHARV
RGADVSISVCPYCAVGCSQLVYTKDGRIIDIEGNYESPINGGTLCPKGAATWQLIHSPLR
QLRVKYRAPYSDHWEERPLEWAMERIAQLVKQTRDATFVHRDDQGMVVNRTLGIAHLGGA
TLDNEENYLIKKLFTGGLGIVAVENQARIUHSSTVPGLGARLGRGGATTTLASLAESDCI
VIMGSNMAENHPVGFRFVVRARQAGATVIHVDPRFSRTSALADLYVPIRPGSDLVFLGAL
VNYVVNHERWQTDPFFREYVLHYTNASVIVSADFRDTEDLAGLFSGYRAEQRRYDSASWH
YAAQIHRVEGERWPCRPLVEPERDLTLQHPNCAFQLVKRHFARYTPELVEEVCGVPRELF
LRVAETILANSGRERTTAFCYAVAWTQHTIGTQIISCCALLQLLLGNIGRPGGGILALRG
HATIQGSTDIPTLFDLLPGYLKMPRAIPEHATLASYFASERPATGLWYDMPKFLISLLKA
WYGDAATPENDFGYTFLPKIGGDYSFQSILTMMEDGIIKGLFVMGMNPAVGGQNARLARR
ALANLDWLVVRDVHEIETASFWYDAPEVRNGEVRSQDIRTEVFFLPAAIAAEKDGTFTNT
HRLVQWHDKAIDPPADARSEAHFVYHLGRRLKELYADDDSPAGQQIRALTWDYPTTGPHQ
EPELMAIAREISGYRVADGRPIAGFHELADDGSTACGCWIYAGIVTPEGEHRAKRRQGDD
RASLDWGFAWPANRRILYNRASADPQGRPWSERKKWIWWDPEQGRWVGYDVPDFPATKPP
DYQPTPGAKGLDAHPGTAPFVMMLDGLGWLFVPTGLADGPLPTHYEPWESPVPNLLYPTQ
PRSPVAPLFLRPDNPYHEIGDPRYPYVITTYRLTEHHTAGGMSRWVPWLAELQPAGFVEI
SPELARELGIANGDWVVVETARGAAEARALVTERVQPLRIAGRTVHVIGMPWHFGFGGLA
TGGIANELAALVEDPNSLIHEAKSFTCTVRKGRLREGTEP
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcaggcgctccaactcttcggctatcatggacgcgcgacagcggtcttcgacca
agcgccggcaaggagagcggagggcgagcgttcatgaggcttctccaacagctgcgacag
cacgtcggtttcgttccgaacccggtgagcgagacgacgcgccaggctcatgcacgcgtc
cgcggcgccgacgtcagcatcagcgtctgcccctactgtgcggtcggatgctcccagctc
gtctataccaaggacgggcgcatcatcgacatcgaggggaactacgagagtccgatcaac
ggcggaacgctctgtccgaagggagccgccacctggcagctcatccacagcccattgcgc
cagctccgcgtcaagtaccgcgcaccgtacagtgaccactgggaagagcgtccgctggag
tgggcgatggagcggatcgcccagctcgtcaaacagacccgcgatgcaaccttcgtgcat
cgcgacgaccaggggatggttgtcaaccgcacgctcgggattgcgcatctaggcggggcg
acgctggacaacgaggagaactatctcatcaagaagctgttcactggcggactggggatc
gtcgcggtcgagaaccaagcgcgcatatgacactccagcacggtgcccggtctgggcgcc
cgactgggtcgaggcggtgcgacgacgacgctggcgagtctggccgagagcgactgcatc
gttatcatgggctcgaacatggccgagaaccacccggtcggcttccgcttcgtcgtcagg
gcacgccaggctggtgcgacggtgattcacgtcgatccgcgcttctcgcgcacctccgcg
ctggccgatctgtacgtcccgatccggccaggcagtgatctcgtcttcctcggcgcgctg
gtcaactatgtcgtcaatcacgagcgctggcagaccgatccattcttccgcgagtacgtt
ctacactacaccaatgccagcgtgatcgtctccgctgactttcgcgacaccgaggacctc
gccgggctcttcagcggataccgagccgagcaacgccgctacgattccgcgagctggcac
tatgccgcgcagattcaccgcgtcgagggtgagcgctggccctgccgcccgctggtcgag
ccggagcgggatctgacgctccagcatcccaactgcgccttccaactcgtgaaacggcac
ttcgcgcgctatacgccggaactcgtcgaggaagtctgcggcgtgccgcgtgagctgttc
ctccgcgtcgccgagacgatcctcgccaactccggccgcgagcgaacgaccgctttttgt
tacgcggtcgcctggacgcagcacaccatcggcacgcagatcatctcgtgctgcgccttg
ctgcagctcctgctcggcaacatcggccgccccggcggaggcattctggcgctccgtggg
cacgccaccatccagggatcgaccgacatcccgacactcttcgatcttttgcctggctac
ctcaagatgccgcgcgcgatcccggagcacgcgacgctcgcgagctacttcgccagcgag
cgccccgcaactggcctctggtacgacatgcccaagttcctgatctcgctcctcaaggcg
tggtacggggatgcggcgaccccagagaacgatttcggctacaccttcctccccaagatc
ggcggcgactactcgtttcagtcgatcctcaccatgatggaggacgggatcatcaaggga
ctcttcgtcatggggatgaacccagccgttggcgggcaaaacgcgcggctggcccgccgc
gcactggccaatctggactggctggtggtgcgggatgtccatgagatcgagacggcctcc
ttctggtacgatgccccggaagtgcgcaacggcgaggttcggtcccaagatatcaggacc
gaggtcttcttcctcccagcggcgatcgcggcagagaaggacggcaccttcaccaacacg
catcgcctcgtccagtggcacgacaaagccatcgatccaccggccgatgcgcgctccgag
gctcatttcgtctaccacctcggccgtcgcctcaaggagctctacgccgacgacgattct
ccggccggtcagcaaatccgagccttgacctgggattaccccacgaccggaccgcaccag
gagcccgagctcatggcgatcgcccgcgagatcagcgggtatcgtgtcgctgacggacga
ccgatcgccggattccatgaattggctgacgacggatcgactgcctgcggttgctggatc
tacgcgggtatcgtcacaccggagggcgagcatcgcgccaagcgccgacagggcgacgac
cgtgccagcctcgattggggcttcgcgtggccagccaatcgccgcattctctacaaccgc
gcttcagctgacccacagggtcgcccctggagcgaacggaagaagtggatctggtgggac
cccgagcagggacgttgggtcgggtacgacgttcccgatttcccagccaccaagccgccc
gattaccagccgactcccggggccaaggggctcgacgcacaccctgggacagctccgttc
gtcatgatgctcgacggcctgggctggctcttcgtgccgaccggcctcgccgatggtcca
cttccgacacactacgagccgtgggagagcccggttcccaacctgctctatccgactcag
ccacggagtccggtcgcaccgctcttcctccgccccgacaacccgtatcacgagatcggt
gatccacgctacccctacgtcatcaccacctaccggttgaccgagcatcatacagcgggc
gggatgagtcgctgggtaccgtggctcgccgaactgcagccggctggcttcgtcgagatc
agcccggagttggcccgcgagctgggtatcgccaatggcgactgggtggtggtcgagacc
gcccgtggcgcagctgaagcgcgtgcgctggtcaccgagcgcgtgcagccgctccggatc
gccgggcggacggtgcatgtcatcgggatgccctggcacttcggcttcggcggactggca
acgggagggatcgccaacgagctggctgcgctggtcgaggatcccaactcgctcatccac
gaggccaagtcctttacctgcacggttcgcaaaggacgactacgcgaagggactgaacca
tga
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