Triplophysa rosa: 130545248
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Entry
130545248 CDS
T09216
Symbol
trpc4apb
Name
(RefSeq) transient receptor potential cation channel, subfamily C, member 4 associated protein b isoform X1
KO
K11796
Trpc4-associated protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tros01009
]
130545248 (trpc4apb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130545248 (trpc4apb)
Protein phosphatases and associated proteins [BR:
tros01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130545248 (trpc4apb)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130545248 (trpc4apb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3689
MAPB1_N
Motif
Other DBs
NCBI-GeneID:
130545248
NCBI-ProteinID:
XP_057175659
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Position
LG21:12043962..12050075
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AA seq
775 aa
AA seq
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MATRGPGFARTQTSKRNTRKNILSKIRHGQITGVGLTRGTQVPVALLEERDKRVKWQGIP
ALLRRLHESSHPNSDLSNIHSMVMELSSLLSMEAMSFVTEERKTPLQSISPNTYTFDLFG
GVDLFVEILIRPTLTVQGDLPILSDDLIKDCLSVLYNCCICTEGVTKSLAARDDFVTFLF
TLMSNKKVFLQTATLIEDILSVRKEMVQLDEIPNLPSLVQSFNQQQLANFCRILSVTISE
PDVGVDDKHTLLARSTQQKTSTCPSRSETNQVTLLNIPGFIERLCKLATRKVTEAAGASA
RLELEDWHSWLDNALVLDALMQLAIEEAEQSSTESSDESSLSSSPLRHRLPQSMKIVHEI
MYKVEVLYVLCVLLMGRQRNQVHRMLAEFKLIPGLNNLFDKLIWRRQPAVHVLHRQNQSC
DCSPEISFKIQFLRLLQSFSDHHENKYLLLSGQELNELSDIYLNANIFEMEALNNTDRNL
VCDGKKGLLTRLISVMKKEPIDSSFRFWQARAVESFLRGTPSYADQVFLLRRGLLEHILN
CIIDSGCTSHDVLQSYFDLLGELMKFNIDAFKRFNKYVNTEEKFQRFLTQINSSLVDSNM
LVRCIVLSLDRFESQTKDMKVVEVFSECRLLSYMAQVENRLSFLFRLINIINVQTLTQEN
VSCLNTSLVILMLARRRVKLPSYLSALREKEYAEKYPGCLLNNFHNLLRFWQHHYLNKDK
DSTCLENSSCVPFAYWKETVSVLLGNADSGRSSRCAISTYIDEAYRDLNRDFMEL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacggggccctgggttcgcacggacccaaacaagcaaaagaaatacacgcaaa
aacatccttagtaaaatccgtcatggtcaaatcacaggtgtgggattgactagagggact
caggttcctgtggctctgctggaggagagagataaaagagttaaatggcagggaatacca
gcgttactaaggagacttcatgagagcagccaccctaacagtgatctctctaacatccac
agtatggtcatggagctgtcgtcattgctgtctatggaggccatgtcatttgtcacagag
gagcgcaaaacaccactgcagtctatttcacctaatacatatacatttgacctctttgga
ggagttgatttgtttgtagagattctaatacgaccaacactcacggtgcagggagaccta
cccatactgagtgatgatctcatcaaggactgtctgagcgttctttacaactgctgtata
tgtacagaaggcgttacaaaaagcctggcagcgagggatgattttgtcacgtttcttttt
acgcttatgtcaaacaaaaaggtttttctacaaactgccactctgatcgaggacattcta
agtgtcaggaaggaaatggtgcaactggatgaaattcccaacctccccagtttggtccag
agcttcaatcagcaacagctggccaatttctgtcgtatcctttcagtcaccatatcagag
ccagatgtgggtgtggatgacaaacacaccctcctcgcccgcagtacccagcaaaagacc
agcacctgcccatcacgatctgagaccaaccaggtaactctgctgaatatccctggcttt
attgagcgcctttgtaaacttgccacgcggaaagtgacggaggcagcgggagcctctgcc
cgcttggaacttgaagactggcacagttggcttgacaacgctctggtgctggatgctctc
atgcagttagcaattgaggaagcagagcagagcagtacagagtcatctgatgagagttcc
ctgtcctccagtccgcttagacacagattgcctcagtccatgaagatagtacatgagatc
atgtataaagtggaggttctttatgtgttatgtgtgttacttatgggccgacagagaaat
caggttcaccgaatgcttgctgagttcaagttaatcccaggactcaataacctttttgat
aaactgatctggagaagacagccagctgtccatgtcttacatcgacagaaccagagttgt
gactgcagtccagagatctcattcaagattcagtttctcagactgttgcagagtttcagt
gatcaccatgagaataagtacctcctcctaagtggacaagaactgaatgaactgagtgac
atctacctgaatgccaatatctttgaaatggaggctctgaataacacagacaggaacctt
gtgtgtgatggtaaaaaaggtcttcttacacggttaatctcagtcatgaagaaagagccg
attgattcatcattcaggttctggcaggcgagagcagttgagagttttcttagaggaaca
ccatcatatgccgaccaagtgttcctgctcagaagaggtttgttagagcacattctcaat
tgcatcatcgacagcgggtgcacgtcccatgatgtccttcagagctactttgacctactt
ggtgagcttatgaagttcaacatcgacgccttcaaaagattcaacaaatatgtcaacact
gaggaaaagtttcagaggttcctgacccagatcaacagctctctggtggactctaacatg
ctggtgcgatgtatcgtcctttctctggaccgctttgagagtcagactaaagacatgaaa
gtggttgaagtgttttcagagtgccgtctcctgtcctacatggctcaagtggagaacagg
ttgtctttcctgtttagactgatcaacatcatcaatgtgcagactctcacacaggagaat
gtgagctgtctgaacaccagtctggtgattctgatgctggcgaggaggcgggtaaaactg
ccttcctatctgagcgctctgagagagaaagagtatgccgagaaatatcccggctgcctg
ctcaacaacttccacaacctgctgcgcttctggcagcaccactacctcaacaaggacaag
gacagcacctgccttgagaatagttcatgtgttcccttcgcctactggaaggagactgtg
tcggtactgctgggtaatgcagattctggaagaagctcacggtgtgccatttccacctac
attgatgaagcttacagggacctgaacagagatttcatggagttgtga
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