Triplophysa rosa: 130545405
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Entry
130545405 CDS
T09216
Symbol
nfatc2a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2 isoform X1
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
tros
Triplophysa rosa
Pathway
tros04020
Calcium signaling pathway
tros04148
Efferocytosis
tros04218
Cellular senescence
tros04310
Wnt signaling pathway
tros04370
VEGF signaling pathway
tros04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130545405 (nfatc2a)
04370 VEGF signaling pathway
130545405 (nfatc2a)
04020 Calcium signaling pathway
130545405 (nfatc2a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130545405 (nfatc2a)
09143 Cell growth and death
04218 Cellular senescence
130545405 (nfatc2a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130545405 (nfatc2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130545405 (nfatc2a)
Transcription factors [BR:
tros03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
130545405 (nfatc2a)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
130545405
NCBI-ProteinID:
XP_057175848
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Position
LG21:3169923..3200831
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AA seq
900 aa
AA seq
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MSSFYGDKAALGLAEELSQVNCQDELEFADLFEYGFSAGHQDEPSISSHKDLNSPPGLSY
HLEEAPPYGIKPCVPTYLEVGAEGLSGFEQLDAKSYLEQVGTNSHALSPRIEITPSREHY
SHGRESLQHHLVNTSPSPGLTVPGHDPLAYREPQCLSPASSNSSTSWHSENLSPWASPCV
SPSNSQAAGELCPRLQGVHTGSPRTSPGTSPHTILAEDGSVGPRSPSPRPGSRSTSPLCK
RTYEMYRNPNLVPGSRSRSPSPHSGHDEHHGGHYGLNNLSGGLNGFGVGQVSSIPPKIVK
TSQQAYPLYTENHTESYLVSCDQDVKTKPGSEPFFVIPQIWPKQLVPGICSIPVTSLPPL
EWPLPKRTDQYELHIEVQPKPHHRAHYETEGSRGAVKAPTGSHPVVQLRGYRGKEPLGLQ
IFIGTADERILKPHAFYQVHRITGKTVTTTSYEKIINGTKVLEIPLEPKNNMKAIIDCAG
ILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPQQGGQTVSLQLASHPIECSQRSAHEL
PMVEKQDMDSCSVLGGQQMILTGQNFSADSKVIFTEKTHDGQQIWELEATVDKDKSQASM
MFIEVPPYRDPSICHPSKVNFYVINGKRKRSQPQHFTYTPLPVPSIKTEPVDDYDSRQVR
YSMSQMMGVSPQSYYNPRGIIAPDSGLVPALIPCQQVRLGVSPPDHRFQQQNPVIYPRPA
KAVASSPSVVYSQTGASMMPDSHRSVLVHTGSPAQSSHLGGPHPTNQHPSIIQFSPTNHH
LLRGGDPPAPPPPEHQHIIYCEGYNQAVGTSRSPAPAQAPQQSQNYPTVIQQQPFVPRVA
KDRSPPVQVESQRCSSAEEQGSSAPGRVTVKQENLDQAYLDDVNEIIRKDLTGVHGRGQT
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgttttacggagataaagcggcgttggggctggcagaggagctgagtcaggtg
aactgccaggatgagctggagtttgccgatctctttgaatatggattttctgcgggacat
caagatgagccaagcatctcctcacacaaagacctcaactctcctcccggcctttcctat
cacctggaggaagccccgccttacggcatcaagccttgtgtgcccacctacctggaggtc
ggcgctgagggtctctctggtttcgagcaactggacgcaaaaagctacctggagcaggtc
gggaccaacagccacgccctgagccccaggatcgaaattaccccttcccgtgagcactat
agtcatggtcgagaatccctccagcaccatcttgtgaacaccagccccagtcctgggctc
accgtgccgggtcacgatcccttagcttaccgagagccacagtgcctgagtcccgccagc
agcaactcatccacctcctggcactcggagaacctctcgccctgggcgtcgccctgcgta
tcgcccagcaacagtcaggcagcgggggaactttgcccgcgactccagggcgtccatacg
ggatctcctcgtacgagtccgggaacctccccccataccatcctggctgaggacggctcc
gttgggccgcgctctccttcgcctaggcccgggtcacgttccacctcccccctatgcaaa
cgcacctacgagatgtacaggaaccccaacctggtgccagggtcccgctcgcggagcccg
tcaccgcacagtggccacgatgagcatcacggtggccattatggtctgaacaacctgtcc
ggtggcctgaatgggttcggagtcgggcaggttagctccattcctcctaaaattgtgaag
accagtcagcaggcctatcctctgtacacggagaaccacactgagagctacctggtgtcc
tgtgaccaggacgtaaaaaccaaacctggttctgaacctttctttgtaattccacaaatc
tggcctaaacagctggtgcctgggatatgcagcatccctgtgacgtctctgcctcctctg
gagtggccgctacccaaacgcaccgatcagtacgagctgcacatcgaggttcagcccaaa
ccccaccacagagcccattacgaaaccgagggcagcagaggggcggttaaagcccccact
ggaagtcacccggtggtccagctccgtggatacaggggcaaggaacctctgggccttcag
atctttattggcacggcggacgagcggatcctgaagcctcatgctttctaccaggtccat
cgcattaccggcaaaaccgtcaccaccaccagctacgagaagatcataaacggcaccaaa
gtcctggaaatccctttagagccaaagaataacatgaaagcaataatcgattgtgccgga
attctgaagctccggaatgctgacatcgagctgcgcaagggggagacggatattggccgg
aaaaacacccgcgttcgactggtgttccgtgttcacatcccgcagcaaggaggccaaact
gtgtcgctccagctggcttcgcatcccatcgagtgctcccagagatcagctcacgagctg
cccatggtggagaaacaggacatggactcctgttcagttctcggaggtcagcagatgatt
ctcaccggccagaacttcagtgcagattcaaaggttatcttcacagagaagactcatgat
ggacagcaaatttgggaattggaagccacagtggacaaagataaaagtcaggcaagcatg
atgttcatcgaggtgcctccttacagagacccgtccatttgccatccctctaaagtgaac
ttctacgtaataaatggaaagcggaagcgcagtcaacctcagcatttcacctacacgcct
cttccagttccgtctattaagaccgagccggtggatgactacgattccaggcaggtgaga
tactccatgtcacaaatgatgggggtgtctccccagtcgtactataacccgcgcgggatc
atcgcccctgacagcggcctggtgcccgccctcatcccctgccagcaggttcgcctgggc
gtctctcctccggaccaccgtttccagcagcaaaacccggtcatctacccccgtcctgcg
aaggccgtggcgagcagtccctctgttgtatactcccagacgggagcctctatgatgccc
gactctcatcgctcagttctggtgcacacaggctccccggcccagtcctcccacctgggt
ggcccacatccaaccaaccagcatccctccatcatccagttctctcccaccaaccaccac
ctgctcagaggaggagatcctcccgcaccaccgcctccagaacatcagcacatcatttat
tgcgagggctataaccaagctgtcggaaccagccgctcccctgccccggcgcaggcacct
cagcagtctcagaattacccaacagtcattcagcaacagccgtttgtgccgagggtggcc
aaagacagatcgcctcccgtccaggtggagtctcagagatgttcctccgcggaagagcag
ggaagcagcgctcctggaagagtcacggtgaagcaggagaacctggatcaggcgtatctt
gatgacgtgaatgagatcataaggaaggatctgacaggagtgcatggcagaggtcagaca
taa
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