Triplophysa rosa: 130545518
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Entry
130545518 CDS
T09216
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
tros
Triplophysa rosa
Pathway
tros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130545518 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130545518 (exosc10)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
130545518 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
130545518
NCBI-ProteinID:
XP_057176040
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Position
LG21:complement(12665259..12674866)
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AA seq
898 aa
AA seq
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MAASSSSAATTKHNEQSASSKETDAETEFCPGFKDADAFVKHGLGCVVAATKASAALPQA
GDEFDLYRSFPAFQEFCASQGDRLLHCMSQIMQQHGCRSRMRDRNKLTGLEDRFDLVVDS
NDAILEKVGILLDEASGVNRTQQPVMPTGYQPPKIVVSSWNRGGGRGTETFHLLHAKNIQ
RPQLKFKEKVDNSNTPFVSKIFIKPNALKPLSSYFTDKHIRRERPEDLDVPAALADLIHQ
QRTQEHVDDMFSHPYQYELDHLAMLESLNCKPEPQMYTSIAETSFKFIYMLEDLVALNEK
LAKMSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLQLRSEMYILNETFTNPAIVK
VFHGADSDIEWLQKDFGLYVVNMFDTHQAARALNLGRNSLDHLLKFYCEVESDKRYQLAD
WRIRPLPDEMLKYARADTHYLLYVYDRARADLHDMGNGQPTLIQQVWSKSRDLSLKKYVK
PIFTEDSYMELYRKQKKSYNTQQLAAFRMLHAWRDKLARDEDESTGYVLPNHMMMKITEE
LPKEPQGIIACCNPTPPLVRQQVNELHQLMKQAREIPLLKAESLLERRKSVTPKRKLQSS
LFGPHDTSRSSESDFLDLSIETPTKPGVLFSEEEDCMDEDLKSLHSLLASAKISLFAENQ
EKVPASGNLTVAQQKAHSIMASFENPFRMYLPSKDIHISEKAKYDPSSKIYEIRNRWKLQ
SIEQQQKEVQAKQQAKEQAKKAQEERKKAKQSYQESLENVHSVRHQVMEAKQSGQKRERV
ASDVNEESVKPNTTILKTDTESTQKDKSSTPAPKKHKAKALQDPQVSTQNFKPYDYSQSN
MKMFDGKSKESSQFDPNRQEPESKQKKRRQKQSSLGGRTMSYVPATSERGFRHNWPKR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcctcgagtagtgctgctactactaaacacaacgaacaatctgcgtcatct
aaagaaacagacgcagaaacagagttttgtccaggttttaaagatgctgatgcgtttgtc
aagcatgggctgggatgtgtggtcgctgccacaaaggcgagtgcggctcttccgcaggcc
ggagatgagtttgatctgtaccgcagctttcctgcgtttcaagagttctgcgcgtcacag
ggagatcgccttttacactgcatgagtcagatcatgcaacagcatggctgtagatctcgc
atgagagacaggaacaaactgacgggtctagaggaccgatttgacctggtggtggattcc
aatgatgccattcttgagaaagtgggcattctcctggatgaagcctctggtgtgaaccgc
acacaacagcctgtgatgcctactggatatcagcctcccaagattgttgtgtctagttgg
aatcggggaggaggtcgaggcactgaaacctttcatcttctgcatgctaaaaacatccag
cgtccacagctgaagttcaaggagaaagtggataacagcaacactcccttcgtctccaaa
atctttatcaaacccaacgctttaaaacctctgtcttcatattttaccgacaaacacatt
cggagggagagaccggaggatttggatgttcctgctgcgctggcagatttgatccatcag
cagagaacacaggagcatgtggatgatatgttttctcacccctaccagtatgaattggat
catctggccatgctggagagcctcaactgtaaacccgaaccacagatgtatacatcaatt
gctgagaccagctttaagtttatctacatgttggaggatcttgttgctttgaatgagaag
ttggccaagatgtcagagtttgctgtggatttggagcatcattcctacagaagctttcta
ggaatcacgtgtctgatgcagatatcgacacgtgaggaagatttcatcatagacacgctg
caactgcgcagtgaaatgtacattttaaatgagacgttcactaaccccgccattgtgaag
gtgtttcatggggctgactcggacatcgagtggctgcagaaggacttcggtctctacgtt
gtcaacatgtttgacacccatcaggctgctcgtgccctaaacctcggtagaaactccctc
gaccatctcctgaagttctactgtgaggtggaatcggataaacgctaccagctggccgac
tggaggatacgacctttgccagacgagatgttgaagtacgctcgggcggacactcactat
ctgctgtacgtgtatgatcgagcacgggccgaccttcatgatatgggcaacggacagccc
accctcattcagcaagtctggtctaaaagcagagacctttcactcaagaaatatgtgaag
cccatctttactgaggactcgtatatggagctttaccgtaagcagaagaagagttacaac
acgcagcagctagctgccttcagaatgctgcacgcctggagagataaactggcacgagat
gaagatgagagcactgggtatgtcttaccaaatcatatgatgatgaagatcacagaggag
cttccaaaggaaccccagggcatcatcgcctgctgtaacccaactccacccctagtgcgt
caacaggtcaatgaacttcatcagcttatgaaacaggctcgagagattcctctactgaag
gcagagtcccttctggaaagaaggaaatctgtaaccccaaaaagaaagctccagtcttca
ttatttggacctcatgacacgtcccgttcatctgaaagtgatttcctggacctctccatt
gaaaccccaaccaagcccggagttttgttttcagaggaggaggattgtatggatgaagat
ctaaaatcattgcacagtctattagcatctgcaaaaatcagtctgtttgcggagaatcag
gagaaggttcctgcctctggtaatctgacagtagcacaacaaaaagcccacagcatcatg
gcatccttcgagaatcctttccgaatgtatttaccatcaaaggacattcacatatcagaa
aaagccaaatatgacccatcatcaaagatttatgagattcgcaaccgctggaagttgcag
agtattgagcagcagcagaaggaggttcaagccaagcagcaagctaaagaacaagccaag
aaagctcaagaggaacgtaagaaagccaaacagagctaccaggagtcactggaaaatgtt
catagtgtcaggcatcaagttatggaagcaaagcagtccggccaaaaaagagagcgagtg
gctagtgatgtaaatgaagagagtgttaaaccaaacacaacaatcttgaagacagatacc
gagagcacacagaaagataaatccagcacacctgctccaaaaaaacacaaagccaaagct
ctccaagatcctcaagtctccacacagaactttaaaccttacgactacagccaatcaaat
atgaaaatgtttgacggcaaatcaaaagagagttcacagtttgatccaaacagacaagaa
cctgaatccaagcagaagaaaagaagacaaaagcaaagttctttaggaggcaggaccatg
tcttatgtacccgcaacatctgagagaggttttcgtcataactggcccaagagatag
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