Triplophysa rosa: 130545815
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Entry
130545815 CDS
T09216
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc)
KO
K04646
clathrin heavy chain
Organism
tros
Triplophysa rosa
Pathway
tros04142
Lysosome
tros04144
Endocytosis
tros05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130545815 (cltca)
04142 Lysosome
130545815 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130545815 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130545815 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130545815 (cltca)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
130545815 (cltca)
Exosome [BR:
tros04147
]
Exosomal proteins
Proteins found in most exosomes
130545815 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
130545815
NCBI-ProteinID:
XP_057176573
LinkDB
All DBs
Position
LG22:complement(12908733..12940134)
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AA seq
1681 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADSNI
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQMSSKHNVVFLVTKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIQYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPDQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLVQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDSSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDADLWASVL
LESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISSELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGQEFRLAQMCGLHIVVHADELEELINYYQDRAYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMS
HPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFISEEDYQAVRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSESVR
KEEEQATETQPIVYGTPQLMLTAGPSVPVPVPPQQPYGYGYSAAPGYPQAPQAQPGFGYG
M
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcccatcagattccaggagcacctgcagctccaaaacttagggatc
aatccagccaacatcggtttcagcaccctgacgatggagtcagataagttcatctgtgtg
cgggagaaggttggagagcaggcgcaggtggtgatcattgacatggcggactcaaacatc
cccatccgcaggcccatctctgcagacagcgccatcatgaacccagccagcaaagtcata
gcgctcaaagctgctaaaacccttcagatctttaacatcgagatgaagagtaagatgaaa
gcccataccatgaccgatgatgtcactttctggaaatggatctctcttaacactgtcgcc
ctggtgaccgataacgccgtctaccattggagcatggagggagactctcagccgatcaaa
gtgttcgacagacattccagcctggcaggatgtcaaatcatcaactaccgcaccgatgcc
aagcagaagtggctgctgctcattggcatttcagctcagcaaaacagagttgttggtgcc
atgcagctgtactcagttgacaggaaggtgtcacagcctatcgagggtcatgctgctgct
tttgcccagttcaaaatggagggaaacacagaggaatccactctgttttgttttgctgtg
cgaggccaggcaggaggaaagcttcatattattgaagtgggcacaccaccgaccggcaac
cagccgttcccaaagaaagccgtggatgtgttctttcctcctgaagcacagaatgacttc
ccagtggccatgcagatgagctccaaacataatgtcgtctttctcgtcactaaatacggt
tacattcatctgtatgacctggagaccggcacctgcatctacatgaacagaattagtggc
gagaccatttttgtgactgcaccccatgaagctacatctggaatcattggagtcaatagg
aaaggacaggtgttgtcagtgtgcgtcgaggaagagaacatcattcagtacatcaccaat
gtgctgcagaatccagatctggctttacggatggcggtccgaaataatctggcaggggcc
gaggagctgtttgcccgcaagtttaacaatctctttgctggaggaaactactccgaggcg
gctaaagttgccgctaacgctccgaagggtatcctgcgcacccctgacaccatccgccgt
ttccagagcgttccggcccagcccgggcagacgtccccgctgctgcagtatttcgggatc
ctgctggaccagggccagctcaacaagtatgagtctctggagctgtgcagacccgtcctc
cagcagggccgcaaacaactgctggagaaatggctgaaggaggacaagcttgaatgctca
gaggaactgggagacctggtgaaagctgtggaccccactcttgcgctcagcgtctatctg
agggccaacgtaccgaacaaagtcattcagtgcttcgcagaaaccggccagttccccaag
atcgtactgtacgctaaaaaggtgggctacactccagattggatcttcctgctgaggaac
gtgatgaggatcagtccagatcagggtctccagttcgctcagatgcttgttcaagacgag
gagccgctcgctgacattacacagatcgttgatgtgtttatggaatataacctggtccag
cagtgcacatcattcctgttagacgctctgaagaacaacaggccgtcagaagggccgctg
cagacccgtctgctggagatgaacctaatgcatgcaccgcaggttgctgatgccatcctt
ggaaaccagatgttcaccaactacgatcgtgcccacatcgcccagctgtgcgagaaggcg
gggcttctgcagagagctttggaacactacaccgacctgtacgacatcaaacgagctgtc
gtacacacacacctgctcaacccggagtggctggtgaactactttggctctctatcagtg
gaagactctctggagtgtctgagagccatgctgtccgctaacatcaggcagaaccttcag
atctgcgtccaggtggcctccaagtatcacgagcagctgtccacccagtcccttacagag
cttttcgagtctttcaagagttttgaaggcctcttctatttcctgggctcgattgtgaac
ttcagccaggacccagaagtccatttcaaatacatccaggccgcatgcaagacgggccaa
atcaaagaggtggagcggatctgtcgggaaagcaactgctacgaccccgaacgtgtcaag
aacttcctcaaggaagccaaactcaccgatcagctgcctctcatcatcgtgtgcgatcgc
tttgacttcgtccatgacctcgtgctctacctgtaccgtaacaacctgcagaagtacatt
gaaatctacgtgcagaaggtgaatccgagccgtctgcctgtggtgattggaggtcttctg
gatgttgactcctcagaggacgtcatcaagaatctgatcttggtggtgcgtggtcagttt
tccaccgatgagctggtggccgaggtggagaagagaaacagactgaagctgctgttgcca
tggctggagtctcgtatccacgagggctgtgaagagcctgctacccacaatgccctggcc
aagatttacatcgacagcaacaacaacccagagcgcttcctccgggagaacccgtactac
gacagccgcgtggtggggaagtactgcgagaaaagagaccctcatctggcctgcgtggcg
tatgagagaggacagtgcgaccaggagctcatcaatgtgtgcaatgagaactcactgttt
aagagtttgtcacgttacctggtgcgccgcagagatgcggatctctgggccagcgtgctt
ctagagtccaaccccttcaggaggcctcttattgaccaggtggtacagacagccttgtca
gagacacaggacccagaggaggtgtcggtcacagtgaaggccttcatgaccgctgacctg
cccaatgaactcattgagctgctggagaagatcgtcctggataactctgtcttcagcgag
cacagaaacctgcagaatctgctcatcctgacggccattaaagcggatcgcactcgcgtc
atggaatacatcaaccgcctggacaactatgacgcccctgacatcgccaacattgccatc
agcagcgagctctttgaggaggcctttgctatcttcagaaagtttgacgtcaacacatct
gcggttcaggttctgatcgagcacattggtaatctggaccgggcatatgagtttgcagag
cgctgtaatgagccggccgtgtggagtcagctggctaaggctcagctacagaaggggctg
gtcaaagaggctattgactcctacatcaaagctgatgacccctctgcttacatggaggtg
gtccaggctgctgaccagagtggtaactgggaggacctggtgaagtttctgcagatggcc
agaaagaaggccagagagtcatacgtggagactgagctgatctttgcactggccaaaacc
aatcgtctcgctgaactggaagagtttataaatggaccaaacaatgcacacatccagcag
gttggcgatcgttgctacgacgagaaaatgtatgaggcagccaagctgttgtacaacaac
gtctcaaacttcggccgcttggcatccacgctggtccacctgggcgagtatcaggccgct
gttgatggagcccgcaaagctaacagcactcgcacatggaaggaggtgtgctttgcgtgt
gtggacgggcaggagttcagattggcacagatgtgcggtcttcacatcgtggtccacgct
gatgaactggaggagctcatcaactactaccaggaccgtgcctactttgaggagctgatc
accatgctggaggcggcgctggggctggagcgtgctcacatgggcatgttcaccgagctg
gccatcctctactccaaatttaaaccacagaagatgagggagcacctggagctcttctgg
tccagagtcaacattccaaaggtgcttagggcggcagagcaggctcacctgtgggcggag
cttgttttcctctatgacaagtatgaagaatttgacaatgccatcatcaccatgatgagt
catcccacagacgcctggaaagaaggacagttcaaggatatcatcacaaaggtggccaac
gtggaactgtactacaaagcgatccagttttatctggagttcaagcccttgttactgaac
gacctgctcattgttctgtccccgagactggatcactcgcgagccgtcaacttcttcagc
aaggttaagcagcttcctctcgtcaagccttacctgcggtcagtccaaaaccacaacaac
aagtccgtcaacgaagcacttaacaacctcttcatctcagaggaagactatcaggctgta
aggacgtccatagacgcatatgataacttcgataacatctccctagcccagcgcctggag
aagcacgagctcatcgagttcagaagaatcgctgcttacctcttcaagggcaacaaccga
tggaagcaaagcgtggagctctgcaagaaagacaaactctacaaggatgccatgcagtac
gcatccgaatcgaaggatacagagctggccgaggagcttctgcagtggttccttcaggaa
gacaagaaagagtgtttcgcagcttgcctcttcacatgctacgacctgctcaggcctgat
gtggtgctggagaccgcatggaggcacaacatcatggacttttccatgccttacttcatt
caggtgatgagggaatacctcagcaaggtggacaagctggagacctcagagtctgtaaga
aaagaagaggagcaggcgacagagactcagccaattgtttatggaacacctcagctgatg
ctcacagcaggtcccagtgtgcccgtgcccgttcccccacaacagccctacggctatggg
tactcggcagcacccggctacccccaggctcctcaagcccagcctggttttggttacggc
atgtaa
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integrated database retrieval system
