Triplophysa rosa: 130546033
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Entry
130546033 CDS
T09216
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130546033 (trpc4a)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130546033 (trpc4a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_4
PKD_channel
Ank_3
Ank_5
YVC1_C
BAR_4
Motif
Other DBs
NCBI-GeneID:
130546033
NCBI-ProteinID:
XP_057177054
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All DBs
Position
LG22:complement(11707313..11724146)
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AA seq
929 aa
AA seq
DB search
MSQLYFRRTGNFTYKDRIPLRIVRAESELSPQEKAYLCAVEKGDYASVKQALIEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSYNIYVGDAILHAIRKEVVGAVELLLNHKK
PSRGMQVPPILLDKQFSYFTPDITPIILAAHTNSYEIIKMLVQKGVAIPQPHPVRCNCME
CVSSSDVDSLRHSRSRLNIYRALASPSLISLSSEDPFLTAFQLSWELQELSKVENEFRSE
YEELSQQCKQFAKDLLDQTRSSKELELILNYKDDINLLEDEGNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWASKFITCMFIGFLFPFFSLFYLVAPKSHYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHVVPNMPIQQGPAPTTVEWMILPWVLGFVWAEIKQ
MWDGGFQDYIHDWWNLMDFIMNSLYLATISLKIVAYIKHSGDVDRVNWYMYHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YDEPAFKSSCNDTCKGIRCSTQNNAFTTMFETLQSLFWSIFGLVSLYVTNVGPDHQFTEF
VGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPS
PFNIIPSPKSLWYLFCWIRSQCFNVKIRKRTETFGALGVRAAENVRTNRQYQEVLRNLVK
RYVAAMIRDAKKEEGLTEENFKELKQDISSFRYEVMGMMKVTKLGMPASTATTGASNLVC
PDSSLKCNPTSGGSQLMGKKRLQSVTTSIIQERGTKANSWNSGGLNSPADSSVLNRTVAS
GLCHQIGNRGTNNPGEIYSVSEEAGESETEEHNDGEENGNPNCKATENQNTGTDVERDEP
VKEDDEVLRNRCICDKSNEINSEYEGCRL
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctctactttcgcagaacggggaacttcacatacaaggaccggatcccgctg
cggatagttcgggctgagtctgagctgtcacctcaggagaaggcctacctgtgcgctgtg
gagaaaggcgactacgccagtgtcaaacaagctctgatagaagccgagatctacttcaaa
atcaacatcaactgcattgaccccctgggacggacggctctgcttatcgcgattgaaaat
gagaacctggaaatcattgagttactgctcagttataacatatatgtgggggatgctatc
ttacacgccatccggaaggaagtggtgggggctgtggagctgcttttgaaccataaaaag
cccagcaggggcatgcaggttcctccgatcctgctggacaagcagttctcctatttcaca
cctgacataacacctatcatcttggctgcccacaccaacagctatgaaatcattaagatg
ctggtgcagaagggtgtcgccataccccagccccacccggtgcgatgcaactgcatggaa
tgtgtgtctagctcagacgtagacagcctgcgacattcccgatcccgtctaaacatatac
cgggccctggcaagcccctcactcatttccctgtccagtgaggacccatttctgaccgcc
ttccagctcagctgggagcttcaagagctcagcaaagtggaaaatgaatttaggtcggag
tacgaggagctttctcaacagtgtaagcagtttgccaaagatctgctcgaccaaacgcgc
agctccaaagagcttgagctgatcctcaactacaaggatgatataaatctcctagaggat
gaagggaataatgatctcgcaaggctgaaactggctatcaagtaccatcagaaagagttt
gtagcacagccaaactgtcagcagctgctggcatctcgctggtatgatgagttcccaggc
tggagacgtcgccactgggccagcaagttcatcacctgcatgtttatcggattcctcttc
cctttcttttccttgttctacctggttgcccccaagagccactacggcctcttcatccgc
aaacccttcattaagtttatatgccacactgcttcctacctgaccttcctctttctcctg
ctattggcctctcaacatgtggtgcccaatatgcctatacagcagggaccggcgcccacc
actgtggagtggatgatcctaccctgggttttaggctttgtatgggctgaaatcaaacaa
atgtgggatggtgggtttcaggattacattcatgactggtggaatctcatggactttatc
atgaattctctttatttggctaccatttcactgaagattgtagcttacattaagcactca
ggtgatgtggatcgggtgaactggtacatgtatcaccccacattggtggcagaggccttg
tttgccatagctaacatattcagctctctgcgactgatttcgctcttcaccgccaactcc
cacctcggccctctccagatctctctcggccgaatgctgctagacatcctcaaattcctt
ttcatttactgcctggtgctgcttgccttcgcgaatgggctcaatcagctgtatttttat
tatgatgaacctgccttcaaaagtagctgcaatgacacttgcaagggcattcgctgttca
acacagaacaatgcattcaccacgatgtttgaaacattgcagtcattgttttggtccata
tttggtctcgtttccctgtatgtgaccaatgttggccctgatcaccagttcacagagttt
gttggagccacaatgtttggtacctacaacataatctctctggtggtgcttctcaatatg
ttaattgctatgatgaacaattcctaccagcatattgccgatcatgctgacatcgagtgg
aagtttgccagaactaaactttggatgagctactttgaggagggtggcacactgccttct
ccattcaacatcattcccagcccaaaatcattgtggtaccttttctgctggatcaggagc
caatgcttcaatgttaaaatcagaaaaagaacagaaacttttggagctcttggggtgcga
gcggctgaaaacgtccgcacaaatcgacagtaccaggaggtgctcagaaaccttgttaag
cggtatgtagcagcgatgatcagggatgctaagaaagaggaggggctaacggaggagaac
tttaaggagctcaagcaggacatctcaagcttccgttacgaggtgatgggaatgatgaaa
gttaccaaacttggcatgccggcctcaacagcaactacaggagcctcaaaccttgtatgt
cctgatagttctctgaagtgcaaccctacttcaggtggaagtcaacttatgggcaaaaag
agactacagagcgtcaccacctctatcatccaggagcgtggcaccaaagccaattcttgg
aattctggaggcttaaacagtccagcagatagctctgtcctaaacaggactgttgcatct
ggactgtgccatcaaataggcaacagagggacaaacaacccaggtgagatttactctgtg
tcagaggaagctggagagtcggagaccgaagaacacaatgatggtgaagagaacggaaac
ccaaattgtaaggcaacagagaatcaaaatacaggaacagatgtagagagggatgagcct
gtgaaggaggacgatgaagtcttacgcaatcgttgtatttgtgacaaatcgaatgagata
aacagtgaatatgaaggatgcagattataa
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