Triplophysa rosa: 130546194
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Entry
130546194 CDS
T09216
Symbol
gigyf1b
Name
(RefSeq) GRB10-interacting GYF protein 1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130546194 (gigyf1b)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130546194 (gigyf1b)
Surveillance factors
Other surveillance factors
130546194 (gigyf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
CAF1A_acidic
TRI4_N
Motif
Other DBs
NCBI-GeneID:
130546194
NCBI-ProteinID:
XP_057177307
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All DBs
Position
LG22:10020091..10034091
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AA seq
994 aa
AA seq
DB search
MTAETLNFGPEWLRALSRGGSVTSPPPSPAMPKSKLADYRYGREEMLALYVKDNKIPEDM
QDQEFASILQEEPLQPLALEPLTEEEQRNFSLSVNSVAVLRLMGKGGGAVPTGVSRGRGT
ARGGRGRGRGEVGFYQRGADEEVGFGRGREMHRSQSWDDRGERRFEKPLRRDGGRGGFEE
GGAGGRKDYARSDSDNWRTLREEQEDMEGAEPGGCWRIAGARRDDGGPRSAGWRDHVSGD
GRRRKFDFDFRDGESGRRRAGSEGGEEERDGLPEWCTDEEEGEMGTFDSSGAFMCIKKSP
RDTIPEDQELDFEPLEEEEESCQEKDSPTDKLEEFDAETIFEGEGKPPSPIVVPAPIHPP
EPETPKPMIKPPSKPAPQPTEDAPPGSVGTQKTQNSSPPMTKSTDLPSVGGDTEEEDGMK
HLQQEAEKMVASLQDTSLEEECFTQALQESHIAAVHAHTHPSSHTHSHSTSHALPHSASA
LPLSHESAMKWFYKDPQGEIQGPFTTVEMCEWFQAGYFTMNLVVKRGCDEGFQPLGEVIK
MWGRVPFSPGPSPPPLLGNMDQELLKKQLEQAASAALYQQLQMRFQHMNRESGIMPAMNR
SMSVPDTGSLWDMPTSVSQQSGGEASLWDLTMSNSTQGPTLEHLQKIQQERREAELRVKR
EEEERKRREEKRRQQEEQKRRDEEELYRRKQCRHQQELIMKFLQQSQQQQSMSGGAGWSG
SQSGSLSLGKTTGKSILELEAERLHKQQQQQRAQQQQRHGGLTMGQWSDGPAGMWGGAGL
EGKLGGGNPAMGMWDEALKNQASHRNMGLKNSRSSPSLSEQYMLNRRKRTEDEDRLLKLL
QGMKPQDGFTTWCEQMLHALNTSANNCSSLDVPTIVAYLKEVESPYEVHDFIRIYLGDTI
EAKEFAKQFLERRAKQKANHQRQQQQLSKEVSGLNMNFPLQSMYQAAHMNKGSSMYDTQG
GKAKKKPSMMLHSDPSILGYSFLGGGELEQVEDY
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagacactcaacttcggtccagaatggctccgtgcactatccagagggggg
agcgtgacgtcccctcccccttcccctgcaatgccaaagtccaagttggccgactaccgt
tatggccgcgaggagatgttagcactttatgtcaaagataacaagatccctgaggacatg
caggatcaggagttcgcctccatcctgcaggaagagcctctgcagccgttggctctggag
cccctaactgaagaggagcagagaaacttctcactgtctgtgaatagtgtggcagtgctg
aggcttatgggtaaaggaggaggtgcggtaccaacaggtgtgtctagagggcgtggaact
gctcgaggaggcagagggagaggcaggggagaggttggattctaccaaagaggtgcagat
gaagaggttggctttggccgtggacgagaaatgcaccgcagccagagctgggatgacaga
ggtgagcgacgctttgagaagcccttgaggcgtgatggtgggcgaggtggatttgaagag
ggcggagcaggaggaaggaaggattatgcccgctcggacagcgataactggcgtacactc
agagaggagcaggaggacatggagggggcggagcctggggggtgctggaggattgcaggg
gcacggcgtgatgatggtggtcctcgttcagcgggttggcgggatcatgtcagcggagat
ggccgacgtagaaagtttgactttgacttccgcgatggagagagtggacggagaagggct
ggaagtgaaggaggagaggaagagcgagatggcctacctgagtggtgcactgatgaagaa
gagggagagatgggaaccttcgactcctccggagccttcatgtgcatcaagaaaagcccc
agagatacaatccctgaagaccaggaactggattttgaacctctggaggaggaagaggag
agttgtcaggagaaggacagccctactgataaattggaggagtttgatgcagaaactatc
tttgagggagaaggaaagccaccatcaccaattgttgtaccagctcctatacatccccca
gagccagagacccccaaacctatgatcaagcccccctcaaaacctgcaccccagccaact
gaagatgctcctccaggcagtgtcggcacacagaaaacacagaactcctcccctcccatg
accaaaagtactgacctcccttcagtaggtggagacactgaagaggaagatggcatgaag
caccttcagcaggaggcagaaaagatggtggcatcgctacaggacacgtctcttgaagag
gaatgtttcactcaagctcttcaggagagccacatcgctgcggtgcatgctcacacacac
ccctcttctcacacacactctcattccacctcacacgcactcccacactccgccagcgcc
ctgcctctctcccatgaatcggctatgaagtggttctacaaagaccctcaaggagagatt
caaggcccatttactacagtggagatgtgcgagtggtttcaggcggggtattttaccatg
aacctggtggtcaaacgtggttgtgatgagggttttcaacccctgggagaagtcattaag
atgtgggggcgtgtgcctttttctcctggcccctcccctcctccgcttctgggaaacatg
gaccaggagctgcttaagaagcagttagaacaagctgccagtgcagccctgtaccaacaa
cttcagatgagattccagcacatgaacagggagtctggaataatgcctgctatgaacagg
tctatgtccgtgccagacaccgggtccttgtgggacatgcctacctcagtatctcagcag
tcaggcggtgaggccagtctgtgggacttaaccatgagtaactccactcagggtccaact
cttgaacatttgcagaaaatccagcaggagaggcgtgaagctgaactcagggtgaagcgt
gaagaggaggagaggaaacggagggaggagaaacgccggcagcaggaggaacagaagaga
agagatgaggaagaactttacaggcgaaaacagtgccgtcatcagcaggagttgatcatg
aagtttctgcagcagagtcagcagcagcagagtatgtcagggggtgcggggtggagtggt
agccagtctggatctctgtctctgggcaagactacaggaaagagcatcctggagctagag
gcagagagacttcacaagcagcaacagcagcagagagctcagcagcagcaaaggcatgga
ggtttaacaatgggccagtggagtgatgggcccgctggtatgtggggtggagctggcctg
gaaggaaagctcggaggcggcaaccctgctatgggcatgtgggacgaagccttgaagaac
caggccagccatcgcaacatgggcctgaagaacagccgcagcagtccctcgctcagtgaa
cagtacatgctgaatcgccgtaagcgtaccgaggacgaggacaggcttctgaagctgctt
cagggaatgaaaccacaggatggtttcaccacttggtgtgaacagatgcttcacgctctc
aacacttctgcaaataactgctcttcactggatgtgcccaccattgtggcatatctgaag
gaggtggagtctccatatgaagttcatgacttcatccgcatttatctgggcgatactatt
gaagccaaagagtttgccaagcagtttctggagcgccgtgccaaacagaaagcaaaccac
cagagacaacagcagcagctgtctaaggaggtctctggattgaacatgaactttcccctg
cagtcgatgtaccaggcagctcacatgaataagggcagcagcatgtacgacactcaggga
ggaaaagcaaagaaaaagcctagcatgatgctccactctgaccccagtatcctcggctac
tcattcctggggggaggtgagctggagcaggtggaggattactga
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