Triplophysa rosa: 130546262
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Entry
130546262 CDS
T09216
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130546262 (sbno1)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130546262 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130546262
NCBI-ProteinID:
XP_057177415
LinkDB
All DBs
Position
LG22:17540190..17552296
Genome browser
AA seq
1402 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDLFEVDPQDTLPPPASQQSVSINALDIGLGNEASGMVRIA
STVPPAPTVTIREKPQPSTTTFVLNQLNQLPSLGTIVVTKPSAGTTTRQTITVTKVVHTS
PAAQRSLSSSPTVCHGVPPNNEQIRLKDLLRSSSLKTSSLGELMKLKPPPDIAQPVATAT
ATGTKFILVSTKMMNRSAESNNGLKKEVSGKDVARIWVNDDMKMRSFSPVNKLPGMKEED
EPEEEEEEELGHAETYAEYMPMKLRIGLRHPDSVVETSSLSSVNPPDVWYRLSIPEETID
RGWLSALQLEAITYAAQQHETFLPNGDRASYLIGDGAGVGKGRTIAGIIYENYLLGRKRS
LWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIG
ESQSGGKYKTRFKQLLHWCGDDFDGVIVFDECHKAKNVCPIGSSKPTKTGLAVLELQNKL
PKARVVYASATGASEPRNMAYMNRLGIWGEGTPFKEFTNFIQAVERRGVGAMEIVAMDMK
LRGMYIARQLSFTGVTFKIEEVPLSPNYIKMYNKSVRLWVSAREKFQQAANLMDAEQRMK
KSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEARTLEALEEG
GGELNDFVSTAKGVLQSLVEKHFPAPDRQKLFSLLGIDLSAKKTPSPLETITEQKGKKRK
GTETKKEVKKARKSGGLSGTSSDESNSDDLDGDSDDSFKSVSSGEDEEDFNPFKDDSSED
DEDDPWLIRKDTKKNKEKRNKKKKKSIDPDSIQSALLASGLGTTRPTFTAPAVKPSNNTV
PVAKSESEESSCVTSQDAVEDAQRMKRDLLEQLEKLAEHLPPNTLDELIDELGGPDNVAE
MTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGISLQ
ADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIV
AKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVSLDSPLVSPPADFDG
DFFKEIRNGLIGVGLINVEDRCGVLSLDKDYNNIGKFLNRILGMEVQQQNALFQYFSDTL
SAVIQNAKKSGRYDMGILDLGSGDEKVKKVEVKKFLTPGYSTSGHVELYTVSVERGMSWE
DATHVWADQNGPDDGFYVQVRNNKKIAILVKEVNSRKRFFMVYRPNTGKQVKLETYADLK
KRSKKVLSDDAKQHWIDQYNSSADVCSHAYWRGNCKKASVGLQCEIGLRCRMYYVLCGSV
LSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLINILSSSDQSQQL
AVQQQQMWQQLHPQSISHGINT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggatccaggacaggatttgcttctggctgctcttagtgaaagtggaatatgccctaat
gatctttttgaggttgaccctcaggacactcttccaccccctgcctcacaacagtcggtc
tcaataaatgcgcttgacattggtctgggtaatgaagcgtctggtatggtcagaatcgcg
tctaccgttccacctgcacctacagtcacaatcagggagaagcctcagccctcaaccact
accttcgtcttaaatcagctaaatcagttgccatcgctggggaccatcgtagtcaccaaa
ccatcagccgggaccactaccaggcaaaccatcacagtaaccaaggtggtccacacaagc
ccagcagcccagcggagcttgtcatcctctccaaccgtttgccacggggtccctcccaac
aatgagcagatcagattgaaggaccttctcagaagcagcagcctaaagacgagcagcctt
ggagagctcatgaagttgaagcccccacctgacatagctcagcccgttgctacggcaaca
gccacaggcacaaaatttattctggtctccacaaagatgatgaacagatcagcggaatca
aacaatggtttgaagaaagaagtgtctggcaaagacgtagcaagaatctgggtcaacgat
gacatgaaaatgcggagcttctcacctgtcaataaactacccggaatgaaggaagaagat
gaaccagaagaggaggaagaagaggagttgggtcatgcagagacatatgctgaatacatg
ccaatgaaactgaggattggcctgcgtcaccctgattctgtcgtggagaccagctcgctc
tccagcgtcaacccgccagatgtttggtacagactttcaataccagaggagaccattgac
agaggctggttatctgcccttcagctcgaggccatcacatacgctgcccagcaacatgag
acattcctaccgaatggagacagagcatcttatttgataggagatggagctggtgttgga
aagggaagaaccattgctggcatcatatatgagaattatcttcttggcaggaaaagatca
ctctggtttagcgtgtcaaatgacttgaaatacgatgcagagagagatttgagagacatt
ggtgcaaagaacattcaggtccattcactaaacaagtttaaatacggaaagatctcctca
aaacacaatggcagtgtgaaaaaaggtgttatctttgccacatactcctctctgattgga
gagagtcagtctggaggaaaatataagacaagatttaagcagctgctacactggtgtgga
gatgactttgatggggttatcgtctttgatgaatgtcacaaagccaaaaatgtttgccct
attgggtcatccaagcctacaaaaacgggcctggcggttcttgagctacagaacaagctg
ccaaaagcccgggttgtttacgctagtgctacaggagcatctgaacctcgcaacatggcc
tacatgaatcgactcggtatctggggtgaaggaactccgtttaaagaattcacaaatttc
atccaagcggttgagagaagaggtgttggtgccatggagattgttgccatggatatgaag
ctgagaggaatgtacatcgctcgacagctgagcttcacaggcgtgacgtttaaaattgaa
gaagttcctttgtcgcccaactacatcaaaatgtacaacaaatcagtccgcttgtgggtg
agtgccagggagaagtttcagcaagccgctaacctgatggatgcagaacaacggatgaag
aagtccatgtggggtcagttctggtcggctcaccagaggttcttcaagtacctgtgtatt
gcctctaaggttcggagagtggtgcagttggcccgggaggaggttaaaaacggaaagtgt
gtggtgattggtcttcagtcaaccggagaggctcgaaccctcgaagcattagaggagggc
ggaggcgagcttaatgactttgtctcgacagcaaaaggcgtgttgcagtccctggtggag
aaacatttccctgctccagacagacagaagctcttcagtttgttgggcatcgacctgtct
gccaagaaaacaccttcacctttagaaaccatcactgagcagaaagggaaaaagcgcaag
ggtacagaaacaaagaaggaagtgaagaaagcccgtaaatccggaggtctgtctggaacc
agctcagatgagagcaactctgatgatttagatggtgacagtgacgacagctttaaatcc
gtcagctcgggagaggatgaagaagacttcaacccatttaaggacgattccagcgaggat
gatgaagatgatccttggctcatcagaaaagacacaaaaaagaacaaagagaagagaaac
aagaagaagaaaaagagcatcgatccagactccatccagagtgccttgttagcatccggg
ctgggaaccaccaggcccacctttacagcacctgctgtcaaaccttcaaataacacagtt
cctgtcgccaagagcgagtcagaggagagcagttgtgtgaccagtcaagatgctgtcgag
gacgctcagaggatgaagagagatctgctggaacaactggagaagctggcagaacacctg
ccacccaacactttggatgaacttatcgatgagctcggaggccctgataatgttgcagag
atgaccggacgtaaaggcagggtcgtcagcaacgacgatggcagcatttcctacgaatcg
cgatccgagctggatgttcctgttgaaatcctgaacctcacagagaagcagaggtttatg
gatggagaaaagaacattgcgatcatctccgaggctgccagctcgggcatttcacttcaa
gccgaccgcagagtgaagaatcagaggaggagggtgcacatgaccctggagctgccgtgg
agtgctgacagagccattcagcagtttggtcgaacgcacagatcaaaccaggtcacagcc
cccgagtacgtgttcctcatatctgaactggccggagaacaaagatttgcttctattgtt
gccaaacgattggagagcctgggtgctcttactcacggtgacagaagagccactgagacg
agagatctcagccggtttaactttgataacaagtatggcagaaatgctcttgaaatagtc
atgaagtctatcgtcagtttggattctcctttagtttctccacctgctgactttgatggg
gatttttttaaagaaatacggaacggtttaattggtgtaggactgataaatgtggaggat
agatgtggtgttctctcactggacaaagattacaacaacatcgggaagttcttgaacaga
attcttggtatggaggttcagcagcagaatgccctctttcagtatttctcagatactctc
agtgctgttatacagaacgctaaaaagagcggcagatatgacatgggaattttagatttg
ggctctggagatgagaaagtgaagaaagtcgaagtgaaaaaattcctgaccccaggatat
tccacctcaggacacgtggagctctatacagtgagtgtggagcggggaatgtcatgggag
gacgccacccacgtctgggctgatcaaaatggaccagatgatggcttctatgtacaggtg
cggaataacaagaaaattgccatcctggtgaaggaggtcaactccagaaagagattcttc
atggtgtacaggccaaatacaggaaaacaagttaaactggagacctacgcagatcttaag
aagagaagtaaaaaggttctgtctgatgatgccaagcagcactggatcgatcagtacaac
tcctcagctgatgtctgctcgcatgcgtattggcgagggaactgcaagaaggcctccgtg
gggttgcagtgtgagatcgggctgcgctgcaggatgtactacgtcctctgtggttctgtc
ctcagcgtgtggaccaaagtggagggcgtactggcctcggtcagcggaaccaacgtgaag
atgcagattgtgcgcttgagaacggaggacgggcagagaattgtgggtctgatcattcca
gccaactgtgtctctccgctcataaacatcttgtcatcgtcggatcagtcgcaacagttg
gcagtacagcaacaacagatgtggcagcagcttcatcctcagagcatcagccatggcatc
aacacgtag
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