Triplophysa rosa: 130546327
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Entry
130546327 CDS
T09216
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
tros
Triplophysa rosa
Pathway
tros04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130546327 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130546327 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130546327 (vps36)
Membrane trafficking [BR:
tros04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
130546327 (vps36)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130546327 (vps36)
Exosomal proteins of colorectal cancer cells
130546327 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
Xre-like-HTH
BBL5
V-ATPase_G_2
Motif
Other DBs
NCBI-GeneID:
130546327
NCBI-ProteinID:
XP_057177508
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All DBs
Position
LG22:11208538..11214704
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AA seq
382 aa
AA seq
DB search
MDRFMWTNGLLEMNETLVIQQRGVRFYDGEDKAKLDVGIVLLTTHRLLWRDQKNHECCIY
IPLSQIIFFEEQAAGIGKSAKIVIHLHSASQNKEPGPYQKSKYSYIKLSFKEHGQIEFYR
RLTEEITQKRWENTPVSQPIPTGTGPKAGRTRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTQ
YHIQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRIFDSGVMVVQLQSHSEEEMIASALDNVTDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKIGHICRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacagatttatgtggacaaatggactccttgagatgaacgagacgttagttatccag
caaagaggagtgcgattttacgacggggaagacaaggctaaacttgatgtggggattgtt
ctactgactacacatcgcttgctctggagagatcaaaagaaccacgaatgctgtatatac
atacccttgtcacagattatattttttgaagagcaagcagcaggcattggaaagagtgcc
aaaattgtcatccacctgcactcggcctcccaaaataaggagccaggcccctaccagaag
agcaagtattcttatataaagctgtccttcaaggaacacgggcagatcgagttttacaga
cgtctaacagaggagataactcagaaacgatgggagaatacgcctgtgtcacagccgata
cccacgggaacaggacccaaggcaggaaggacacgcgcagtggggattgtgggtattgag
cggaagttggaggagaagagaaaagagacagataaaaatatttcagaggcttttgaggat
ctaagcaaactcatggaaaaggctaaagagatggtggagctctccaaatctattgccaat
aaaatcaaagacaaacagggtgacatcacagaagatgagacaatccgcttcaagtcttat
ttgctgagtatgggcatagccaacccagttaccagagaaacacacggttcaggaacacag
taccacattcagctcgccaaacaactcggggacatgctgcaggctccactggaggagcgg
ggaggaatgatggccctcactgaagtgtactgtctagtgaacagagcccgagggatggag
cttctctctccagaggacttggtcaatgcctgtaaaatgtttgagtcacttaagctccct
ctgcggttgcgaatatttgacagcggggtgatggtggtacagctccagtcccacagtgag
gaggagatgattgcctcagctctagataatgtgactgataagggctcccttacagctgaa
gagtttgccaagcttttaggactctcagttcttctttctaaagagcggttgttattagcc
gagaaaattggtcacatatgccgtgacgattcagtagaaggtctgcgtttttatccaaac
ctgttctga
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