Triplophysa rosa: 130546364
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Entry
130546364 CDS
T09216
Symbol
etf1b
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic peptide chain release factor subunit 1b
KO
K03265
peptide chain release factor subunit 1
Organism
tros
Triplophysa rosa
Pathway
tros03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130546364 (etf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130546364 (etf1b)
03012 Translation factors [BR:
tros03012
]
130546364 (etf1b)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130546364 (etf1b)
Translation factors [BR:
tros03012
]
Eukaryotic type
Release factors
130546364 (etf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
130546364
NCBI-ProteinID:
XP_057177564
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All DBs
Position
LG22:9422620..9432299
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AA seq
442 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALXFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQGKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRCHGENTTPENDEKILYLTPEQEKDKS
HFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRY
RVDFQGMEYQGDDDEFFDLDDY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcagcggataggaacgtggaaatttggaagattaagaagttg
atcaaaagccttgaggcggccagaggaaatggtaccagtatgatttccctcatcatccca
cccaaggatcagatctcacgtgtagcgaagatgttggccgatgagtttggcacagcctcc
aacattaagagcagagtcaacagactttctgtgctgggagccattacctcagtacagcag
agactcaaactctacaacaaagtgcctccaaatggcctggtggtgtattgtggcaccata
gtgacggaagaaggcaaagaaaagaaagtcaacattgattttgagccttttaagccaatc
aacacatccttgtatttatgtgacaacaagttccatactgaggcactaacagcgctgctg
tcagatgacagtaagtttggtttcattgtgattgatggtagcggcgccctgtttgggacc
ttacaaggcaacacaagggaggtgttgcacaaatttacagtggatctgcccaaaaaacac
ggcagaggtggacagtctgctctttgatttgcgcgtttgagaatggagaaaagacacaac
tacgtgcggaaggtagcagagacggctgttcaactgtttgtgtccaatgacaaggtgaat
gtggctgggctggtgcttgctggatcggcagacttcaagaccgagctgagccagtcagac
atgtttgatccgaggttacaaggtaaggttctaaaactggtcgacatatcgtacggagga
gagaatgggttcaaccaggccatcgagctctcagcggaagtgctgtccaatgtgaaattc
atccaagaaaagaaactcataggccgatatttcgatgagatcagtcaggacacagggaag
tactgttttggtgttgaagacacgctcaaagcgctggagatgggagcggtggagattctt
atagtttacgagaacttggacactatgcgctatgtcctgcgttgtcatggagaaaacact
acacctgaaaacgatgaaaagatactctacctgacaccagaacaagagaaggacaagtct
catttcactgacaaggagacgggtcaggagcacgagctgatcgagagcatgccgctgctt
gagtggtttgccaataactacaagaaatttggagccacgctggaaatcgttacagacaag
agccaggaaggctcacagtttgtgaaaggctttggaggcatcggtggaattttgcggtac
cgggttgatttccagggcatggagtaccaaggagatgacgatgaattctttgacttagat
gactactag
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