Triplophysa rosa: 130546404
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Entry
130546404 CDS
T09216
Symbol
pum3
Name
(RefSeq) pumilio homolog 3
KO
K14844
pumilio homology domain family member 6
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130546404 (pum3)
03009 Ribosome biogenesis [BR:
tros03009
]
130546404 (pum3)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130546404 (pum3)
Ribosome biogenesis [BR:
tros03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
130546404 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
Bmt2
RXT2_N
Motif
Other DBs
NCBI-GeneID:
130546404
NCBI-ProteinID:
XP_057177653
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Position
LG22:3469440..3522897
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AA seq
474 aa
AA seq
DB search
MVSRTRRYRCQTFLWYRHFFRYWYQNRNNPNYHLVELSKSKYARNIVKKFLMYGNKQQVG
HVMLAFKGNVRQMLRHSEASSVVEYAYNQKAILSQRLMLTEELYGNTFQICKSTVCPTLV
KVLENNPEKLESIVEEMKQILTPLAQKEAVIKHSLVHKVFLDFFEHAPAKQRTEMIESIR
EAVVYMAHTHDGARVTMHCLWHGTPKDRKVIVKTMKTYIAKFATGEYAHLILLAAFDCID
DTKLVKQIIISEMLSSLSEIISTKHGKKVLLYLLSPRDPAHLLPELIQLLQKGDGNAHSK
KDVGIRRRELLETISSPLLTYLCKNTQSMVMDKASSVAVSDILGSAVGNLRPAMEAVAAL
AAEPFVPDGENGQLHMAEHPAGHLVLKWLIEQDAKMKETEREDRFSRILLEKVGLENLKT
WASVNRGAIVLCCLLQSADESVAEEVKVALKSILPELHKMQNSKGVKILLEKLA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaagaactcgccgataccgatgccagacttttttgtggtatcggcattttttc
cgatactggtatcagaatcggaataaccctaattatcacttggtggagttgagtaaatca
aaatatgccagaaacattgtgaagaagtttctgatgtatggaaataaacagcaggtgggt
catgtgatgttggcttttaaggggaacgtcagacagatgctcaggcactcagaggcgtcg
tcagtggtggagtatgcatacaatcaaaaagccatcctctcacagagacttatgcttact
gaggagctctatggcaacacattccaaatctgcaagtccacagtttgtcctacactagtg
aaagttttggaaaataatccagagaagctagagagcattgtggaggaaatgaagcagatc
ctcacaccactggcacagaaggaggctgtaattaaacattcactggttcacaaagttttt
ctggacttcttcgagcatgccccagccaaacagagaacagagatgatagagtccatcaga
gaggcagtagtgtatatggcgcacacacatgatggagccagagtaaccatgcactgctta
tggcatggcacacccaaagaccgaaaagttatagtaaaaacaatgaaaacatacattgca
aaatttgcaacgggtgaatatgctcacctaattcttctagcagcctttgattgcattgat
gacaccaagctggttaaacagattatcatctcagaaatgctaagttccttgtctgaaata
atcagcactaaacatggtaaaaaagtgctgctttacctgctaagcccaagagaccctgca
caccttctacctgagctaattcagctgctccaaaaaggtgacggtaatgcacatagtaaa
aaggatgtaggaatcagaaggagggagctgttggaaaccatttcttctcctctgctgacg
tatctgtgcaagaacacacagtctatggtcatggataaagcaagtagcgtcgctgtcagt
gacatcttggggtccgcagttggtaacctcaggcctgcaatggaggccgtggcagccctg
gcagctgagccctttgtaccagatggagaaaatggccagctgcatatggcagaacaccct
gctggccacctggtgctgaaatggttaatagaacaagatgccaagatgaaggagacagaa
agagaagaccgtttttccagaattcttttggagaaggtggggttagagaacctcaaaaca
tgggcttcagtcaaccgtggtgcaatagttctttgttgcctccttcaaagtgcagatgaa
agtgttgctgaagaagtgaaagttgcactgaaatccatccttcctgaacttcataagatg
caaaactctaaaggagtcaagatcctgctcgagaaactggcctga
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