Triplophysa rosa: 130546526
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Entry
130546526 CDS
T09216
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
tros
Triplophysa rosa
Pathway
tros04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130546526 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130546526 (ppil2)
03110 Chaperones and folding catalysts [BR:
tros03110
]
130546526 (ppil2)
04121 Ubiquitin system [BR:
tros04121
]
130546526 (ppil2)
Enzymes [BR:
tros01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
130546526 (ppil2)
Spliceosome [BR:
tros03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
130546526 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
130546526 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
130546526 (ppil2)
Chaperones and folding catalysts [BR:
tros03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
130546526 (ppil2)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
U-box type E3
130546526 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
Toxin-JAB1
Motif
Other DBs
NCBI-GeneID:
130546526
NCBI-ProteinID:
XP_057177816
LinkDB
All DBs
Position
LG2:33221773..33244653
Genome browser
AA seq
524 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTQFYGGKKSEIPQGNFRRLPFDHCSLSLQPFEYPMCTVDGVV
FDLMSIVPWIKKYGTNPITGEKLEAKSLIKLNISKNNDGKYHCPVLYTVFTNNSHIVANK
VTGNVFSNEAVEQLNIKTKSYKDLLTDEPFTRQDLITLQDPTNLDKFNVSNFFHVKNNLK
VLDPDEEKAKLDPAYHLKTTNLETRETLAELYRDYKGDQLLASTMKEPETKKTDKLNAAH
YSTGRVSASFTSTAMAPATVHEADAIADDAVRYQYVKKKGYVRLQTNKGDLNLELHCDKV
PKAGENFIKLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFWGKKFKDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCTYLDRKHTVFGRVVGGFETLTALENVESDPKTD
KPKSELTILSASVFVDPYEEADAQITAEREKEAQKQEEERAQTSASTSKAKTESQPKTFR
SGVGKYINMAAKKHSHPDSDKPSTSETPAKKPKGRSGFGDFSSW
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagacagcatcaaaaagataagatgtacattacatgtgcagaatacactcag
ttttatggagggaagaaatcagaaattcctcaaggcaattttaggcgactgcccttcgat
cactgcagtctctctcttcagccctttgagtatccaatgtgcacagtggatggggtggtg
tttgatttaatgagcatagtgccctggattaagaagtatggtaccaaccccattactgga
gagaagcttgaagctaaatccctcatcaagcttaacatcagcaaaaacaatgatgggaag
taccactgtcctgtgctgtacaccgtcttcacaaacaactctcacattgttgccaataaa
gtcactggaaatgttttctcaaacgaggctgtggaacagctcaacatcaagacaaagagt
tataaagacctgctgaccgacgagcccttcacccgtcaggatctcatcactttacaggat
cctacaaatctggataaattcaatgtgtccaacttcttccatgttaaaaacaatttgaaa
gtcctggacccagatgaggagaaggccaaacttgacccagcgtaccatcttaaaaccacc
aatcttgagacgcgagaaacgctggctgaactctacagggactataaaggagaccagctg
ttggcttccaccatgaaagagccagaaaccaaaaaaacagacaagctcaatgctgctcac
tattccactggacgagtttctgcatccttcacatccacagcaatggctccagctaccgtt
catgaagcagacgccattgctgatgatgccgttcgataccagtatgttaagaagaaaggc
tatgttcgcctgcaaaccaacaaaggggatttgaatctggagttacattgcgataaggtc
cctaaggctggagaaaactttattaaactgtgcaagaaaggatattacgacggcaccgta
ttccaccgctctattcgaaatttcatgattcaaggaggagaccctacaggcactggtaca
ggcggtgaatcgttttgggggaaaaagtttaaggatgaattcagacccaatctgtcacac
acgggtcgtggcattctcagcatggctaactcgggacccaacacaaataaatcacagttc
ttcataacgttccgctcatgcacatacctggaccggaaacacaccgtgtttggaagagtg
gttggtggatttgagactctcacagcgttggagaatgttgaaagtgatcctaagacagac
aaacccaagtcagagttaacaattctgagtgcttcggtattcgtggacccttatgaggaa
gcggatgcacagatcacagccgagcgggagaaagaggcccagaaacaggaggaggagaga
gcgcaaacttctgcttcgaccagcaaagcaaagacagaatcgcagccgaaaacctttcga
tcgggagtgggcaaatacatcaacatggctgccaagaaacattcccatccagatagtgac
aaaccctccacaagtgaaacacctgccaagaaacccaaaggcagatcgggttttggagac
tttagctcgtggtag
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