Triplophysa rosa: 130546877
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Entry
130546877 CDS
T09216
Name
(RefSeq) guanine nucleotide exchange factor VAV3
KO
K05730
guanine nucleotide exchange factor VAV
Organism
tros
Triplophysa rosa
Pathway
tros04510
Focal adhesion
tros04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130546877
09142 Cell motility
04810 Regulation of actin cytoskeleton
130546877
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
SH3_1
CH
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
C1_2
SRA1
SH2_1
NTP_transf_6
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
130546877
NCBI-ProteinID:
XP_057178372
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Position
LG23:15504107..15572415
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AA seq
851 aa
AA seq
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MEHWKQCALWLINCKVLPANHRVTWESAQVFDLAQTLRDGVLLCQLLNNLRPQSINLREI
NLRPQMSQFLCLKNIRTFSHSCSEILGMKKSELFEAFDLFDVRDFGKVMDTLSKLSHTHV
AQQTGIRPFPTEESVEDEDIYNHLEDLIDENGVEDEEDLYDCVYDDDEGGEVYEDLMKVE
LVQPQKQAETDVRSCCLMEIKQTEEKYTETLDSIEKFFMKPLGQSLSSAEIEKVFINIPD
LVKVHVSLLKEVQDSVLHHNASNLHQIFIKYKERLVLYGKYCSQVESAIACLDDICKNRE
DVRQMLELCSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHDATDKTNLREALDA
MKDLAQYVNEVKRDIETQRDIDQYQKSIENLNQSLRNYGRPKGDSEVRVATVDKRAKQDR
HIFLFDAAVIVCKRRGDNYEMKEVIDLHFFKITNNPTSDRENRKWSHGFYLTHNQGQTGF
EFFFKTKEVKKKWLEQFGMALSNICPESGTSNFHEFRMHTFETTTSCSSCKMLLRGVFYQ
GYRCSKCGVGAHKECLGRVDVCVKSSAGELPTHSNDRGPGLPKMLVIRNYYGVPSPLCGP
PLNIQVGDVIELVEANIRSCWWKGKVLATKEIGFFPSDAVKPCPCVPKPVDYSSQPWFAG
PMERLQAEAALLNRRSSTYLVRHRSRELNEYAISVKYNNDVKHIKILAKEGCFHITENRK
FRSILELIEYYKHHSLREGFRTLDTTLQFAYREPENGANTPLLCGLSFLTTAGYSFVPPS
AAPFWSVFAPKVMGVAIARYDFSSRDTRELSLQEGDVVKIYSKTGANGWWRGEVNGRVGW
FPSTYVEEGEE
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggagcattggaaacagtgcgcgttatggctgatcaattgtaaagtgctcccagcgaac
catcgggtgacatgggagtccgctcaggtgttcgacctggcgcagaccctgcgcgatggg
gtccttctgtgccagcttctcaacaacctgagaccccagtccatcaacctgagggaaatc
aacctgagacctcaaatgtcacagtttctctgcttgaagaacatcaggaccttttcacac
tcctgctcggagatcttaggcatgaagaaaagcgaactgtttgaggcctttgatttgttt
gacgttcgagatttcggaaaggttatggacacattgtccaagctctcacatacacatgtt
gcacagcaaactggaataagaccgtttccaacagaagagagtgttgaagacgaggacatt
tataaccatcttgaggatctgatagatgaaaatggcgttgaagatgaggaggatctatac
gactgtgtgtacgacgatgatgaaggtggagaagtgtatgaagacttgatgaaggttgag
ctggttcagccacagaaacaggcagaaaccgacgtcaggagctgctgtctaatggaaatc
aaacagacggaggagaaatatacagagacgttggactcaatagagaaatttttcatgaag
cctttgggacagtcgctttccagcgcggagattgaaaaagtgttcatcaatattccagac
cttgtaaaagtgcacgtgagcctgctgaaggaggtccaggattctgttcttcatcataac
gccagtaacctgcaccagatctttatcaaatacaaagagagattagtcctgtatgggaaa
tactgcagtcaagtagaatcggccattgcgtgtttggacgacatctgtaagaacagggag
gatgtcaggcagatgttagaattatgctccaagcgtgccaacaatggaaagtttactctg
cgagatctactggttgttccaatgcagagagttcttaaatatcatctgcttctacaggaa
ctggtaaaacacacccatgatgccacagacaagactaatttacgtgaagctctggacgcc
atgaaggacctggcccagtatgtcaatgaggtcaagagagacatcgaaactcagcgggat
atcgaccagtatcagaaatctatagaaaaccttaatcagtctctccgtaactacgggcga
ccgaaaggtgacagcgaagtgcgagtagctacagtcgacaagcgagccaaacaggacagg
cacatctttctatttgatgccgcagtcatcgtatgcaaacgacggggggacaactacgaa
atgaaggaggtcatcgacctccacttcttcaagatcaccaacaacccgacctcagacaga
gagaatcgaaagtggtctcatggattctacctcacacacaaccagggacaaaccgggttc
gagttcttcttcaaaaccaaagaggtcaagaagaaatggttggaacagtttggcatggca
ctatcgaacatctgtccagagagtgggacaagtaatttccatgagttccgcatgcacacc
ttcgagacgaccacatcctgcagctcgtgtaagatgctgttgagaggggtcttctatcaa
ggctaccgctgctccaaatgtggcgtcggcgcccacaaggagtgtctcggcagagtggac
gtctgcgtcaaaagcagcgctggtgagcttcccacacactctaatgacagaggtccgggt
ttgcccaagatgttggtcattcggaattattatggagtccccagccccctgtgcggccca
cccctcaacatccaagttggtgatgtcatcgaactggtcgaagcaaacatacgcagctgc
tggtggaagggtaaagtcctggcaactaaggagattggcttctttccaagcgacgcagtg
aagccttgcccatgtgtacccaaacctgtcgattactcttcacagccatggtttgccgga
cctatggagaggctgcaggcggaggctgcgctgctcaacaggagaagcagcacatatctg
gtccgtcacaggagcagagagttgaatgaatacgccatcagcgtcaagtacaacaacgac
gtgaaacacatcaagatcttagcaaaggagggatgcttccacattaccgaaaacaggaag
ttcagaagcattttagagctgatcgagtattacaaacatcattctctgcgggagggattc
aggacactcgataccacgctgcagttcgcctaccgagagccggagaacggagccaacact
ccgttgctctgcgggctttcttttctaactaccgccggctacagctttgtccctccctct
gcagctccattctggtcagtgttcgctcctaaggtgatgggtgttgcaatagcccgttac
gacttcagctccagggacacacgagagctgtcgctgcaggagggcgatgtggttaagatc
tacagcaaaacaggagccaacggctggtggagaggagaagtcaatgggcgggtgggctgg
ttcccttccacctacgtagaagaaggagaggaatga
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