Triplophysa rosa: 130546916
Help
Entry
130546916 CDS
T09216
Symbol
vim
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
tros
Triplophysa rosa
Pathway
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130546916 (vim)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130546916 (vim)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tros04812
]
130546916 (vim)
04147 Exosome [BR:
tros04147
]
130546916 (vim)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
130546916 (vim)
Cytoskeleton proteins [BR:
tros04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
130546916 (vim)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130546916 (vim)
Exosomal proteins of other cancer cells
130546916 (vim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Laminin_II
CsbD
DUF4515
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
130546916
NCBI-ProteinID:
XP_057178439
LinkDB
All DBs
Position
LG23:complement(14600365..14605661)
Genome browser
AA seq
451 aa
AA seq
DB search
MASRTTTSSYKRIFGGERPAMTRPTYSSRQYGSPVRASSRVSYSVSSAPPSMYMSKSARM
RSSAPMPRLSTDTLDFGVADAINTEFKVNRTNEKAEMQHLNDRFASYIDKVRYLEQQNKI
LIAELEQMKGQGKSRVGDLYEDEMRELRRQMDQLTNEKARVEVDRDNMGEDIERLKEKLQ
EEMLQKEDTENTLRSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIAELQIQIQ
EQHVQIDMEVAKPDLTSALKDVRQQYETLASRNLQESEDWYKSKFADLSEAAARNNDAIR
LAKQEANDYRRQLQSLTCDLEAVKGTNESMDRQMREMEENFAMEANGYQDTVAHLEDDIR
NMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITMPLPNLASLSLRESMKET
KPFTDTKKVVIKTIETRDGHIINESTQNDLE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccgaacaaccacatcttcttataaaaggatcttcggtggggagcgtccagcg
atgactcggcccacctattcgagccgtcagtacggcagcccggtgcgcgcatcatcgcgc
gtctcctacagcgtgtcctccgcgcctccatccatgtacatgtccaagagcgcacgaatg
cgcagcagcgcgcccatgcctagactctccacggacactctggatttcggggtcgctgac
gccatcaacaccgagtttaaagtcaaccgaaccaatgaaaaagcggagatgcagcacctc
aacgacaggttcgccagttacatagataaagtgaggtatctggagcagcagaataagatc
ttgatcgccgagctggagcagatgaagggccagggaaagtcccgggtcggagacctgtac
gaggatgagatgagagaactgcggaggcagatggaccagctcaccaacgagaaggccagg
gtggaagtggatcgggacaatatgggagaggacatcgagcgccttaaagaaaaactacaa
gaagagatgcttcaaaaggaggatactgagaacactctgcggagtttcagacaggatgtt
gacaacgcctctcttgctcgtctggatctcgagagaaaagtggagtccttgcaggaggag
atcgctttcttaaagaaactccacgatgaggaaattgccgagctgcagattcagatccag
gagcagcatgtgcagattgatatggaagtggccaagcctgacctcacctctgcactcaaa
gatgttcgccaacaatacgagaccctggcttccagaaacctccaggagtctgaggactgg
tataaatccaagtttgctgacctgtccgaagctgctgctcgtaacaacgacgccatccgt
ctggccaagcaagaggccaatgactaccgccgtcagctacaatctcttacctgtgactta
gaagctgtcaaaggaaccaatgagtccatggaccgtcagatgagagagatggaggagaac
tttgccatggaggcaaacggataccaggacaccgtcgcacatcttgaggacgacatccga
aacatgaaggatgagatggcccgtcatcttcgtgaataccaggatcttctgaatgtcaaa
atggccctggacattgagattgccacctacaggaagctgctggagggagaggagagtagg
atcaccatgcctttgcccaacctcgcatcattatccctgcgagagtccatgaaggaaacc
aaacctttcactgacactaagaaagtggtgatcaagaccatcgagacaagagacggacat
ataattaatgagtccacccaaaatgacctggaatga
DBGET
integrated database retrieval system