Triplophysa rosa: 130546924
Help
Entry
130546924 CDS
T09216
Symbol
vps41
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
tros
Triplophysa rosa
Pathway
tros04140
Autophagy - animal
tros04148
Efferocytosis
tros05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130546924 (vps41)
04148 Efferocytosis
130546924 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130546924 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130546924 (vps41)
Membrane trafficking [BR:
tros04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
130546924 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
zf_RING_Vps8_fungal
WD40_Prp19
Vps39_1
Beta-prop_EML_2
zf_RING_Vps8
TPR_PEP5_VPS11
TPR_7
Frtz
zf-RING_5
TPR_19
Beta-prop_IFT140_2nd
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
130546924
NCBI-ProteinID:
XP_057178453
LinkDB
All DBs
Position
LG23:10549656..10569429
Genome browser
AA seq
854 aa
AA seq
DB search
MSEVEDQGRKPSEESTDDSEEEDTEEEPKLKYERLTNGVTEILQKDAASCMTVHDKFLAL
GTHFGKVYLLDIQGNVTQKFEISPVKINHISLDESGEHVGVCSEDGKVQVFGLYTREGFH
ENFDCPIKVVALHPQFSKSNNKQFVTGGNKLLLYERNWLNRWKTSILHEGEGNISNVQWX
ANLIAWANNLGVKIYDISTKQRITNVLRDNTSLRPDMYPCSLCWKDNTTLIIGWGSSVKI
CAVKERDPTEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVTLYYIKENSDHMEEEFRT
RPRLDIIQPLPEGCEEISSDALTVRNFQENQCRDYRLEHSEGESLFYIISPKDIVVAKER
DQDDHIDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMSYINHLVERRDYDAAARKCQK
VLGKNMDLWENEVYRFKTIGQLKAISRYLPRGDLRLRPAIYEMILHEFLKTDYEGFATLI
REWPGELYNNMAIVQAVNEHLKKDPSNRTLLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHKHNLFSSINDKIVLLMDFDKEKAVDMLLDNEDKISMDKVVDELKDRPELLHVYLHK
LFKRDHHNGQKYHERQISLYAEFDRPNLLPFLRESMHCPLEKALEICQQRHFVEETVFLL
SRMGNCRRALQMIMEELADVDKAIEFAKEQDDRELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLQRMHRTQK
RGVRVDEENICESCHTPVLPSDTAQAFSVVVFHCRHMFHKECLPSPGTVPGMQYCNICSA
KRRGPGSGILDMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagtggaggaccagggaagaaaaccaagtgaagagtcaacagatgactctgag
gaggaggacactgaggaggagcctaaactgaagtacgagcggctgaccaatggcgtgaca
gagatcctacagaaggatgcagccagctgcatgacggtgcatgacaagttcctggctctc
gggacacactttgggaaggtttacctgctggacatccaaggaaatgttacacagaagttt
gaaattagtccagtgaagataaaccatattagtttggatgagagtggtgagcatgttggc
gtctgctctgaagatggaaaggtgcaagtgttcggcttgtacaccagggagggcttccac
gaaaacttcgactgtcccatcaaggtcgtggcgctgcaccctcagttcagcaagtccaac
aataaacagtttgtgactgggggaaataagctgttgctttatgagaggaactggctgaac
cgctggaagacctctattctacatgaaggagagggaaacatcagcaatgtgcaatggtga
gccaacctcatcgcctgggcaaacaatctcggtgtgaaaatctatgacatcagcaccaaa
cagcgcatcactaacgtgttgcgggacaacaccagtctgaggccggatatgtacccctgt
agtctgtgctggaaagacaacactacactgatcatcggctggggctcttctgtcaagata
tgcgctgttaaagagcgtgacccaacagagatgagagatctacccagtcgctacgttgag
atcgtctctgcatttgagacggagttcttcatcagtggactggcacctctagcagatcag
ctggtcactctgtactacatcaaagaaaactcggatcacatggaggaggagttcaggaca
cggccacgtttggacatcattcagccgttaccagagggatgcgaggagatctcatctgat
gctctcactgtacgcaacttccaagagaaccaatgcagggactacagactcgaacactct
gagggtgaatcgctgttctacatcatcagccctaaagacatcgtagtggctaaagaaaga
gaccaggatgatcacattgactggctgctggagaagaaaaaatatgaggaggcactgatg
gctgcagagatcagctttaaaaacatcaaacgccatgacgttcagaaaattggaatgtcg
tacatcaatcatctggtggagagacgagattacgatgcagccgccagaaaatgccaaaaa
gtgttgggaaaaaacatggatctctgggagaatgaggtgtacagatttaaaaccatcggc
cagttgaaggccatcagccggtacttaccaagaggagacctgcgacttcggccagccatt
tatgagatgatcctacatgagttcctcaagactgactatgaaggctttgccacattgatt
cgtgagtggcctggtgaactgtataacaacatggccatagttcaggcagtgaacgaacac
ctgaagaaagaccccagtaaccgcacactcctcacaacactggctgaactatacacgtat
gaccaacgttacgaccgcgctctggagatctatctgcgactcagacacaaagacgtttac
cagctcattcacaaacacaacctcttctcctccatcaacgacaagatcgtcctgctcatg
gatttcgacaaagagaaagctgttgacatgctgctggataatgaagacaaaatatcgatg
gacaaagtagtggatgagttaaaagacagaccagagctcttacacgtgtatctgcacaag
ctgtttaagcgagaccaccataatggtcagaagtatcacgagaggcagatcagtctgtat
gcagagttcgatcgacccaacctgctgcccttcctcagagagagcatgcactgcccgcta
gagaaggctttggaaatctgtcagcagaggcactttgtggaagaaaccgtcttcctgctc
agccgtatgggaaactgcagacgcgccctgcagatgatcatggaggagctggccgacgtg
gacaaggccattgagtttgccaaagagcaggatgaccgagaactctgggaggatctcatc
tcttactctatagacaaaccaccatttatcaccggcctcctgaataacatcggcacacat
gtggatcccattctgctcattcaccggattaaagaaggaatggagattcccaatcttagg
gactcactggtcaagatcctacaggactataatctacagattttgctgagagagggttgt
aagaagatcctggtggcggattctctgtctctgctgcagaggatgcacagaacacagaag
agaggagtgcgggtggacgaggaaaacatctgtgaatcctgccacactcctgttctacca
tcagacacagcccaggcattcagtgtggtggtctttcactgcagacacatgttccataag
gagtgtcttccatccccaggaaccgttccaggcatgcagtattgtaacatctgcagtgcg
aagcggagaggaccaggcagtggcatactcgacatgaagaaataa
DBGET
integrated database retrieval system
