KEGG   Triplophysa rosa: 130547004
Entry
130547004         CDS       T09216                                 
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
  KO
K22753  E3 ubiquitin-protein ligase RNF6 [EC:2.3.2.27]
Organism
tros  Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:tros00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tros04121]
    130547004 (rnf6)
Enzymes [BR:tros01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130547004 (rnf6)
Ubiquitin system [BR:tros04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130547004 (rnf6)
SSDB
Motif
Pfam: RNF6_N zf-RING_2 zf-rbx1 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-ANAPC11 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-RING_4 zf-RING-like zf-P11 Prok-RING_4
Other DBs
NCBI-GeneID: 130547004
NCBI-ProteinID: XP_057178606
LinkDB
Position
LG23:18892730..18898160
AA seq 679 aa
MDPPGWRDERHRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPRPEPRPQNSEAEGSSGAVEPGAETSNGDSLLEWLNTFRRTGNATRSGQSG
NQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTIDPTELPMPPPPPSSAPAPYSP
SRSAPYSLQHPTPYPTTRPTLGRRAAVRRTRSTAAPPVTPSLTSQAPPAVLRRNLPSLPS
SPPPQAPLLNPSQEQDSGAVRSQIQVTTSSVHAGEGQNGNEDPDCPNAQSGSQVESAGRE
PRNSRTRSRGRVRRATGTGGARSSRRSRSPLDRNPTSSSSPTHSNNTTPVESRGSTAVAV
EMGEAVVEPAAPAGPLPEAGEEEGETPAAGGGGVRRHPTIMLDLQVRRIRPGENRDRDSI
ASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGEPSS
TALRSILRQIMTGFGELSSLMETEANSEAPAPNHESALGAGGQAFRVNGNEGGAAHVGVE
SAQEGLVEAEEEGQVRVNRTGTEGRPNSRDTNNLVENGTLPILRLAHFFLLNEDEDEEHP
RGLTKEQIDNLVTRTYGQVNLEGEQGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWL
SENNTCPICRQPILSSHQE
NT seq 2040 nt   +upstreamnt  +downstreamnt
atggaccctcccggctggcgagacgagcgtcatcgtcaagcggagcggcttcgacgggag
gaggcatactatcactttattaatgaacttagtgaggaggagtacagactgatgagagac
agcaatctcctgggaacacctggtgaagtcacagcagaggagctgaggcagcgcctggat
ggtgcaaaggagcgtgtgtcatctcagccacgccccgaaccacgcccacaaaacagtgag
gcagagggcagcagcggtgctgttgagccaggtgcagagacgtctaacggggattcccta
ctggaatggctgaacacgttccggcgcacaggaaatgccacccgcagcgggcagagcgga
aaccaaacatggcgtgctgtcagccgtacaaaccccaacagcggcgagttccgctttagc
cttgagattaacatcaaccacgagcagcctgaacctggagaacacagtgacacgatcgat
cccaccgaactcccaatgcctcctcccccaccatcatctgccccggccccatacagcccc
tcacggtctgcaccttattcgcttcaacacccgacgccgtatcctacaaccagacccact
ttgggaaggagagctgcggtccgccgcacacgtagtactgcggctccccctgtaacgcca
tcgttgacctcacaagctcctcctgcggtcctcagaaggaacctgccttctttgccaagc
tctccccctccacaggctccactcttaaatccatcccaagagcaggatagtggtgctgta
cggagtcaaatacaggtcacaacctcttcggttcatgcaggggaggggcagaatgggaat
gaagaccctgactgccccaatgctcagtctggctcccaagtagagtcagccggcagggag
ccacgaaacagtaggactcgttcccgaggtcgtgtgcgcagagcaacaggaacgggaggt
gcacgctcctccagacgcagtcgatcccccctagacagaaatcccacttctagtagtagc
cccacccatagtaacaacacgaccccagtggagtcccgtggaagtacggcggttgctgtg
gagatgggagaggccgttgtagagccagccgctccagcaggtcctctccctgaagcaggt
gaggaagagggggagacacctgcggcaggtggtggaggggtgcgacgccaccctacaatc
atgctggatcttcaagtgcgccgtatcaggccaggggagaaccgtgacagggacagcatt
gccagtcgtactcgttctcgggccagagccgctgagaacacagttacctttgagagcgac
agcggtggctttcggcgaaccatttcccgctccgagcgtgcaggaatccgaacttacgtc
agcactatacgcatcccattgcgccgtatttcggaaacgggcctgggcgagcctagctca
acagcgctgcgctccatcttgcgccagatcatgaccggcttcggtgagcttagttctctc
atggagacggaagccaattcagaggctcctgcgcccaatcatgagtccgctctgggtgcc
ggaggccaggcattccgtgtcaacggcaacgagggcggtgcggcccacgttggagtggaa
tcggcacaagaaggtttagttgaggctgaggaggaaggccaggtacgagtgaacagaact
gggacagaaggacggcctaacagcagagacacaaacaatctggtggagaacggcacgttg
cccatcttgaggctggcacactttttccttctcaatgaagatgaagatgaggaacaccca
cggggcctaaccaaagaacagatcgacaatctggtcacacgcacttacggtcaggtcaac
ctggagggcgagcagggccgtgcttgcagcgtgtgcatcaatgagtatgcgcaaggcaac
aagctgcgccgcttgccctgcgcccacgagttccacatccattgcattgatcgctggcta
tctgaaaacaacacctgccccatctgcagacagcctattctgtccagccaccaagaatga

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