Triplophysa rosa: 130547004
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Entry
130547004 CDS
T09216
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130547004 (rnf6)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130547004 (rnf6)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130547004 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-P11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
130547004
NCBI-ProteinID:
XP_057178606
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All DBs
Position
LG23:18892730..18898160
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AA seq
679 aa
AA seq
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MDPPGWRDERHRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPRPEPRPQNSEAEGSSGAVEPGAETSNGDSLLEWLNTFRRTGNATRSGQSG
NQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTIDPTELPMPPPPPSSAPAPYSP
SRSAPYSLQHPTPYPTTRPTLGRRAAVRRTRSTAAPPVTPSLTSQAPPAVLRRNLPSLPS
SPPPQAPLLNPSQEQDSGAVRSQIQVTTSSVHAGEGQNGNEDPDCPNAQSGSQVESAGRE
PRNSRTRSRGRVRRATGTGGARSSRRSRSPLDRNPTSSSSPTHSNNTTPVESRGSTAVAV
EMGEAVVEPAAPAGPLPEAGEEEGETPAAGGGGVRRHPTIMLDLQVRRIRPGENRDRDSI
ASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGEPSS
TALRSILRQIMTGFGELSSLMETEANSEAPAPNHESALGAGGQAFRVNGNEGGAAHVGVE
SAQEGLVEAEEEGQVRVNRTGTEGRPNSRDTNNLVENGTLPILRLAHFFLLNEDEDEEHP
RGLTKEQIDNLVTRTYGQVNLEGEQGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWL
SENNTCPICRQPILSSHQE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcccggctggcgagacgagcgtcatcgtcaagcggagcggcttcgacgggag
gaggcatactatcactttattaatgaacttagtgaggaggagtacagactgatgagagac
agcaatctcctgggaacacctggtgaagtcacagcagaggagctgaggcagcgcctggat
ggtgcaaaggagcgtgtgtcatctcagccacgccccgaaccacgcccacaaaacagtgag
gcagagggcagcagcggtgctgttgagccaggtgcagagacgtctaacggggattcccta
ctggaatggctgaacacgttccggcgcacaggaaatgccacccgcagcgggcagagcgga
aaccaaacatggcgtgctgtcagccgtacaaaccccaacagcggcgagttccgctttagc
cttgagattaacatcaaccacgagcagcctgaacctggagaacacagtgacacgatcgat
cccaccgaactcccaatgcctcctcccccaccatcatctgccccggccccatacagcccc
tcacggtctgcaccttattcgcttcaacacccgacgccgtatcctacaaccagacccact
ttgggaaggagagctgcggtccgccgcacacgtagtactgcggctccccctgtaacgcca
tcgttgacctcacaagctcctcctgcggtcctcagaaggaacctgccttctttgccaagc
tctccccctccacaggctccactcttaaatccatcccaagagcaggatagtggtgctgta
cggagtcaaatacaggtcacaacctcttcggttcatgcaggggaggggcagaatgggaat
gaagaccctgactgccccaatgctcagtctggctcccaagtagagtcagccggcagggag
ccacgaaacagtaggactcgttcccgaggtcgtgtgcgcagagcaacaggaacgggaggt
gcacgctcctccagacgcagtcgatcccccctagacagaaatcccacttctagtagtagc
cccacccatagtaacaacacgaccccagtggagtcccgtggaagtacggcggttgctgtg
gagatgggagaggccgttgtagagccagccgctccagcaggtcctctccctgaagcaggt
gaggaagagggggagacacctgcggcaggtggtggaggggtgcgacgccaccctacaatc
atgctggatcttcaagtgcgccgtatcaggccaggggagaaccgtgacagggacagcatt
gccagtcgtactcgttctcgggccagagccgctgagaacacagttacctttgagagcgac
agcggtggctttcggcgaaccatttcccgctccgagcgtgcaggaatccgaacttacgtc
agcactatacgcatcccattgcgccgtatttcggaaacgggcctgggcgagcctagctca
acagcgctgcgctccatcttgcgccagatcatgaccggcttcggtgagcttagttctctc
atggagacggaagccaattcagaggctcctgcgcccaatcatgagtccgctctgggtgcc
ggaggccaggcattccgtgtcaacggcaacgagggcggtgcggcccacgttggagtggaa
tcggcacaagaaggtttagttgaggctgaggaggaaggccaggtacgagtgaacagaact
gggacagaaggacggcctaacagcagagacacaaacaatctggtggagaacggcacgttg
cccatcttgaggctggcacactttttccttctcaatgaagatgaagatgaggaacaccca
cggggcctaaccaaagaacagatcgacaatctggtcacacgcacttacggtcaggtcaac
ctggagggcgagcagggccgtgcttgcagcgtgtgcatcaatgagtatgcgcaaggcaac
aagctgcgccgcttgccctgcgcccacgagttccacatccattgcattgatcgctggcta
tctgaaaacaacacctgccccatctgcagacagcctattctgtccagccaccaagaatga
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