Triplophysa rosa: 130547082
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Entry
130547082 CDS
T09216
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130547082 (trpa1b)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130547082 (trpa1b)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
130547082
NCBI-ProteinID:
XP_057178718
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Position
LG23:11315423..11337573
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AA seq
1110 aa
AA seq
DB search
MQIGKEFVRQNSFYKCVINDEDGSLDSADVFELAFKGNASAVDRLRRKSREHLSTRDENR
ASPLHYASAGGNLDAIRLIVSVVGSEELNAQDEQGRTALHWAVERNQTQSCALLLELRAD
PNILNTAMMAPLHLAVTNKYNHLVELLLACDRTDPNLEGDLGNTPAMMACSSNNCQAFQT
LFKHGAKMCSQNKLGHYAIHTVAFAGAKESMEMALKIGEEMGISTLVHINYLDKTKSSPL
HLAVRGGNIEVIKLCIAKGARVDQQQCDKSTALHFACTQGATEAVKIMLSSYDRVEEIIN
IRDGANQTPLHRATLFDHIELAEYLVSKGAEINCMDCKGLSPLLLAASSGAWRTVVFLLS
KGADFKIKDKGGRNFLHFATLQPKGLKNLPDAVLQSNTVKEMLSDEDVEGCTPLHYACKL
GIHDSVKNMLGLNIPLGQKSREKKSALHFAAEYGRINTCHRLLDSITDSKMLNEGDDKGL
TPLHFASKGGHTQVVDLLLRRGALFQSDYKGWSCLHHAAAEGYTQTMKILLAANVKLLDL
TNEDGNTALHVAAQAGHVGAIILLLNRGAEMTLNNADSSFLHEAVRSEKKDVVNAVIEHE
RLSEAIQTFKKGTSTSRCVVIDLVEFLPESFKHLLDLCVEESDHDANSPDYHMTYDFQWL
QAPIQLKKFAEADKTMKFLPLAALNAMVQYNRLELLTHPLSQKYLEMKWKAYGSKVHLLN
LAIYLLGLLPLTYLILSLRPCQDFSTNSTSVTMVPVSFKEQKYLISVCIIMVCVMNVYAI
CKELVQLAQQRINYFTDYSNPADWTSAISSLVFVIPMCLNLENTWQWEAGAVAILTSWVS
FLLYFQRFERIGIYVVMFGGIIRTLVCTMVLFIFLLLAFGLAFYALMLHRAEFSSISLAL
AQTFVMTVGELNYQSTFLESFENGRMAFPGTTYLVFVLFVLLMPILLMNLMIGLAVGDIA
EVQRNAELKRIAMQIDLHTTLEEKLPYWFLKRVDKPTITVYPNKCKKVLLQVLVDGEIQN
TVRTRLNLKSGQGGPLERDLHKQKSRLKEMSRMLDKQHNLLKLIIQKMEITSEADEYDGP
QNLRSLRYPSCSSYQKSKWVPLMQALRTRK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgcagattggaaaagagtttgtgaggcaaaacagcttctacaagtgtgtgataaatgat
gaggatggaagcttggattctgcagatgtgtttgagttggcttttaaaggaaatgcttca
gccgtcgaccggctgagacggaaaagtcgggaacacctgagtaccagggatgagaataga
gctagcccattgcactatgcttcagccggtggaaacctggatgcaattcggctcatagtt
tctgttgtgggctctgaggagctgaatgcgcaggatgaacagggcagaaccgctttgcac
tgggctgtggagcggaatcagacgcagagctgtgcattactgctggagctgcgtgctgac
cccaacatcctcaacaccgccatgatggctcctctgcatctggctgtcacaaacaaatac
aaccatctggtagagctccttctggcctgtgacagaacagatcccaatttggagggggac
ctgggtaacacccccgcgatgatggcatgctccagcaataactgccaagctttccagact
ctattcaaacacggtgcaaaaatgtgcagtcagaacaaactgggtcactacgccattcat
acggttgctttcgcaggtgccaaagagtctatggaaatggctttaaaaattggagaagaa
atgggtatttccactttagttcacattaattatctggacaagaccaaaagcagccccctt
catctggctgtacgtggggggaacatagaggtcatcaaactttgcatcgctaaaggagcc
cgagtggatcagcaacagtgtgacaaatccacggccctccactttgcctgcactcagggt
gccacggaggcggtcaaaatcatgctttcgtcctatgacagagtggaagagattatcaac
atcagggatggagccaaccagacccctttacatagggccacactgtttgatcacattgaa
ttggctgaatatctggtttcaaagggagcagaaattaactgtatggactgcaagggactg
tcgcctctgctgctggcagccagctctggtgcttggagaacagtggtatttttactgtca
aaaggtgcagatttcaaaatcaaagataaagggggacgcaacttcctccactttgccact
cttcaacccaaaggtctgaaaaatctacctgatgcagtcttacagagtaacacagtgaaa
gaaatgttgtctgatgaggatgtcgagggctgcactcctcttcactacgcctgcaaactt
ggcatccacgactcggtcaaaaacatgctgggtctcaatatccctctgggtcaaaagtca
cgggagaagaaatcggcccttcactttgctgcagaatatgggcgtataaacacatgtcac
aggctgctggattccatcacagactccaagatgctgaacgagggggatgacaagggtctg
acgcccctccattttgcttcaaagggaggacacactcaagttgttgatctgctccttagg
aggggagctctctttcaaagcgattacaaaggctggtcttgtttacatcatgctgcggct
gagggatacacgcagacaatgaaaatcctcctggctgctaacgttaaactgctggatttg
acaaatgaagatgggaacacagctctgcacgttgctgcccaagcgggtcatgtaggggct
attatattgttattgaacagaggagctgaaatgactctcaacaacgcagacagctccttc
ctgcatgaggccgtgcgcagcgaaaaaaaagatgtagtgaatgccgtcatcgaacatgag
aggctttctgaggcaatacagacattcaaaaagggaacatcaacgtcccgctgcgttgtg
atagacctcgtagaattcctcccagagtctttcaagcatcttctagatctgtgcgttgag
gagtcagaccatgatgccaacagtccagactaccacatgacgtatgatttccagtggctt
caggctcccatacagctgaagaagtttgcagaagcagacaaaactatgaaattccttcca
ctggcagctcttaatgccatggtgcaatacaaccgactggagcttctgactcaccccttg
agccaaaaatacctggagatgaagtggaaagcatatggcagcaaggttcatttgctcaac
ctggctatatatctgcttggcttgttgccgctcacgtacctcattcttagtctgagaccg
tgccaggacttttcaaccaattctacatctgtcaccatggtgcctgtatctttcaaagag
caaaaatatttaatctcagtctgtataatcatggtgtgtgtcatgaacgtatacgccatt
tgtaaagagctggtgcagttggctcagcagcgaataaactacttcaccgactattctaac
cctgctgactggacatccgccataagctctctggtctttgttattcccatgtgcctcaat
ctagaaaatacatggcaatgggaagctggagctgtggcaatcctgacttcatgggtcagc
tttctgctgtacttccaaaggtttgagcgaattggaatttacgtggtcatgtttggcggg
atcattaggaccctggtgtgcaccatggttctctttatcttcctcctgctggcatttggc
ttggccttctacgctttgatgcttcaccgcgccgagttcagctccatcagcctcgctctc
gctcagaccttcgtaatgacagtgggagaactgaactaccagagcacatttctggaatct
tttgaaaatggccggatggcgtttcccgggaccacctatttagtctttgtgctttttgtc
cttctaatgcccatcctcctcatgaacctaatgatcggtctggcagtgggagacattgcg
gaggtacagagaaacgcagaattaaaaaggatagccatgcagattgatcttcacacaacc
ctagaagagaagctcccatactggttcctaaagcgagtggacaaacccaccatcactgtc
tatcccaataaatgcaagaaagtcttgttacaagtcttggtagacggcgagatccaaaac
acagttcgcacccgtttgaacctcaaatccggtcaaggaggacctctggagagagatctg
cacaaacagaagagcaggttgaaagaaatgtccagaatgctggataagcaacataacctg
ctgaagctgatcatacagaagatggaaatcacgtccgaagctgatgaatatgacggcccg
cagaacctcagatctctgagatatccctcttgctcatcatatcagaagtcaaagtgggtc
cctctgatgcaagctcttcggacgaggaagtga
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