Triplophysa rosa: 130547198
Help
Entry
130547198 CDS
T09216
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130547198 (ptbp2a)
Spliceosome [BR:
tros03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130547198 (ptbp2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
130547198
NCBI-ProteinID:
XP_057178937
LinkDB
All DBs
Position
LG23:15092714..15104667
Genome browser
AA seq
494 aa
AA seq
DB search
MDGIGDVTVGVKRGSDELLSSGVYNNPSSGFSSISGATSNGSDSKKQKVEDRVGDSLPSR
VLHIRKLPSDVSEAEIISLGLPFGKVTNILTLKGKNQAFLELSTEEAAMTMVNYYSAVTP
HVRNMPVYIQYSNHKELKTDNSNQSGGTPTSNSSDGGGSPSSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFNDPASAQQAKVALDGQNIYNACCTLRIDYSK
LVNLNVKYNNDKSRDYTRPELPAGDGQPPLDLSVAAALGKDSSSLLGKIPGALNPLTAAA
AAAAAAGRVALSGHSGTTGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILFNKKDSAL
IQMADMNQAQLAMSHLNGQKMFSKIVRVAMSKHQTVQLPRDGLDDQGLTKDFTNSPLHRF
KKPGSKNFQNIFPPSATLHLSNIPQDITEEDLRVLFSNSGGTVKAFKFFLDHKMALIQMT
TIEEAIQCLIDLHN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattggcgatgttacagttggcgtaaagagaggatcagatgaactgttgtcc
agcggcgtgtataacaaccccagttctgggtttagcagcatcagtggtgcaacgtccaac
ggcagcgatagcaaaaaacaaaaagtcgaagacagagtaggtgattcattgccgtctcgc
gttctccacatccgaaagctgcccagtgacgtctcggaagcggagatcatctccctcgga
cttcctttcggaaaggtcaccaacatcctcactctaaaaggcaaaaaccaggcgtttctg
gagctgagcacagaggaagctgccatgacaatggtcaattattactccgctgtcacgcct
cacgtccgcaacatgcctgtttacattcagtactccaatcataaggaactaaagaccgac
aattcaaaccagtcaggtgggactcccacgtccaactcgagtgatggtggaggttcccca
tccagtccggtgctgaggataatcatagataacatgttttaccccgtcaccctggatgtg
cttcaacagatcttttcaaagttcggcaccgtcatgaaaatcatcacgttcaccaagaac
aatcagtttcaggccctcttgcagttcaacgatccagccagtgcgcagcaagctaaagtg
gctctagatggacagaacatatacaacgcctgctgcacccttcgcatagactactcaaaa
ctcgtcaacctgaatgtgaagtataacaatgataagagcagagactacacaagaccggag
cttcctgctggagacgggcagccccctttggacctgtctgtggccgctgctctgggtaaa
gactccagctccctgctcggtaagatcccaggtgccctcaatccgctaaccgcagccgcc
gcagctgcagccgcagccggtagagtcgccctttcaggtcattcagggaccaccggggtt
ctgcttgtcagtaatctaaatgaagagatggttacgccccaaagtctgtttaccctcttc
ggggtttatggggacgtgcagcgtgtgaagattctctttaataagaaggatagtgcgttg
attcagatggccgatatgaaccaggcacagcttgcaatgagccatttaaatggtcaaaag
atgttttcgaagattgtccgcgtcgcaatgtcgaagcaccagaccgttcagttacccagg
gacggtttggacgaccaaggtctcaccaaagacttcacaaactctcccctgcaccgtttc
aaaaagcccggctccaagaacttccagaacatctttcctccttctgccacgctgcatctg
tcaaacatcccgcaagacataactgaagaagacctgagagtcctgttctccaactccggt
ggcactgtgaaagctttcaagtttttcctagatcacaaaatggctcttattcagatgacc
acaattgaagaagccatccaatgcctaattgacctccacaattaa
DBGET
integrated database retrieval system
