Triplophysa rosa: 130547202
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Entry
130547202 CDS
T09216
Symbol
stag1b
Name
(RefSeq) LOW QUALITY PROTEIN: cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
tros
Triplophysa rosa
Pathway
tros04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130547202 (stag1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130547202 (stag1b)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
130547202 (stag1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
Motif
Other DBs
NCBI-GeneID:
130547202
NCBI-ProteinID:
XP_057178942
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Position
LG23:16613332..16631721
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AA seq
1256 aa
AA seq
DB search
MINSDFTVLQDSSNDGQGDTVSLGMSVGELDDSGEGKGKKKRGRPGKQGGASKKVRKSPV
DKGGRRPNGLAHQNGEGAEAGTLFEVVKQGKSAMQCVIDDWIESYKQDRDLALLDLINFF
IHCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMAGPQWKKFRYNFCEFIIV
LIRQCQYSIIYEEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINQ
DNTQRQYETERNKVAGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAI
AEIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQTLYTNRELF
PKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHDSEDALSNEDCENVYHLVYSAH
RPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAYL
VDSLWDSSQDLLKDWDCMVELLLEDPVQGEEVMGDRHESALIELMVCTIRQAAEAHPPVG
RGTGKRVLTAKEKKTQIDDKNKLTEQLIVALPMLLSKYQTEAEKVANLLHIPQFFDLEVY
SSGRMEKHLDALLKQTRVVVEKHTEAEVLEACSKTYSILCSEEYTIMNRVDIARSQLIDE
LTDRFAHSVEDLLQEGDEADDDDIYNVLSTLKKLTAFHNAHDLTKWDLFKNCYRLLKMGI
EQGSMPEQIAVQALQCSHYSILWQLVKITEGSPSKDELVALRRVVKSFLAVCQQCLSNVN
TPVKEQAFMLLCDLLMIFSHQLVSGSREALQPLVFNPDSTLQNELLTFVLDHVFIDQDDE
NQSMEGDEEDEANKIEALHKRRNLLAAFCKLVIFDIVDMAAAADIFKQYMKXYNDYGDII
KETLSKARQMDKIQCAKTLVLSLQQLFNELVQDQGPNLDRTSSHVSGIKELARRFALTFG
LDQIKTREAVATLHKDGIEFAFKVPNPKGPEYPPPNLAFLEVLXEFSSKLLRQDKKTVHS
YLEKFMTEYMMERREDVWLPLIAYRNSLLTGGDDDRLSVTTGSTTSKASTVRSKRGRPAQ
QKRRPDEESMEGSWVMRNDSLQTPGGLHTPQLTSTVLRENPRQAAEHIPDQDSSEPGSEP
DYMHNPPMQMSWLDQQQKMDEVNRKERGGMNYMKSRSGGVRQQVRGLMEDDAEPIFEDVM
MSSRGQLEDMNEDFEDTMVIDLPPSRNRRERAELRPDFFDSTAIMEDDSGFGMQMF
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgatcaattcagactttactgtgttacaggactcgtcaaatgatgggcagggcgacaca
gtaagtctaggcatgagcgtcggtgaattggacgattctggagaaggaaaaggcaagaaa
aagagaggcaggcctggaaaacaagggggggccagtaagaaggttcgaaagtccccggtt
gataaaggtgggcggagaccaaatggattggcccatcagaatggagagggggcagaagca
ggcacgctctttgaggtggtcaaacaaggcaaaagtgccatgcagtgtgttattgatgac
tggattgaatcttacaaacaagaccgagatttggcgcttttagatctgattaacttcttc
attcattgctctggttgtaaaggcactgtaagaatcgagatgtttaggaacatgcagaat
gcagaaattatcagaaagatgacagaagaattcgatgaggacagtggcgattaccccctt
acaatggcaggaccacagtggaagaagtttcgatataatttctgcgagttcatcatcgtt
ctgattcgtcagtgtcagtacagcatcatctatgaagaatatatgatggacacagtcatc
tctttgctcactgggctctcagactcacaggtccgagccttcagacacaccagtacattg
gcagccatgaaactgatgacagcgttggtgaatgtggctttgaacttgagcatcaaccag
gataacacacagaggcagtatgagacagagcggaacaaggttgcggggaaacgagccaat
gaaaagctagaactgctgcttcagaagagaaaagagcttcaagaaaaccaagatgagatt
gagaacatgatgaactcgatcttcaagggtatttttgttcaccgatacagggatgctata
gcagagatcagggctatttgcattgaggagattggagtttggatgaaattatacagcgat
gcctttctcaacgatagttacttgaagtatgttggctggacgctacatgacagacaaggc
gaagttcgactcaaatgtttaaaggcccttcagaccctttataccaacagagagcttttc
cccaagcttgagctcttcaccaatcgatttaaggatcgcattgtgtccatgacgctggac
aaagaatacgatgtggcagtagaggccatacggctcgtcactttgattctgcatgatagc
gaggatgctctatcaaacgaagactgcgagaacgtctaccatctagtctattcggcccat
cgtcctgttgccgtggccgccggagagttcctccacagaaagctgttcagcaggcacgac
cctcaggcggaggaggctttggcaaagagacgaggcagaaacagccctaatgggaacctg
atcagaatgctggtgctgttcttcctggagagcgagcttcatgaacatgcagcgtaccta
gtggacagtctgtgggacagctcgcaagatctgctcaaagattgggactgcatggtagag
ctcctgttggaagaccccgtgcagggagaagaggtaatgggagatagacacgagagcgcc
ctgatcgagctcatggtctgcaccatcagacaggccgctgaagctcatccacctgtgggc
agaggaacgggaaagagagtcctcactgccaaagagaagaagactcagatagacgataag
aacaaacttaccgagcaactaattgttgctctgcccatgctgctgtcaaagtaccaaaca
gaagctgaaaaggttgcaaacctccttcatatcccacagttctttgatcttgaggtgtac
agttcaggacgaatggaaaagcatctagacgctctgctgaagcagacgcgggtggtggtg
gagaagcacacagaggccgaagtgttggaggcgtgcagcaagacctacagcatcctgtgc
agcgaggaatacaccatcatgaaccgcgtggacatcgctcgaagtcagctcatcgacgag
ctcacggacagattcgcacattcggttgaagacctgctgcaggagggggatgaagcagat
gacgatgacatttacaacgttctctcgactttaaagaagctcactgctttccacaatgca
catgaccttacaaagtgggacctttttaaaaactgctatcgattgttgaagatggggatc
gagcaaggctccatgcccgagcagattgctgttcaggctctgcagtgctctcattactcc
atcctgtggcagctggtgaaaatcactgagggatcgccatcaaaggatgaactcgtggca
ttgaggagggtggtgaaatctttcctagcggtgtgtcagcagtgtctgtctaatgtaaac
actcccgtcaaagagcaagcattcatgttgctgtgtgacctgctgatgatcttcagtcat
cagttggtctcgggcagtcgagaagctctgcagccgctggtcttcaatccagacagcact
ctgcagaacgaattgctcacctttgtcctggatcatgtgtttattgaccaggatgatgaa
aaccagagcatggagggcgatgaggaggacgaagccaataagatcgaggctcttcacaag
aggaggaatcttttggcggccttctgcaaactcgttatttttgacatcgtggacatggca
gcagctgcagacatcttcaaacaatacatgaagtaatataatgactatggagacatcatc
aaagaaacattgagtaaggccagacagatggacaagattcagtgtgcaaaaacccttgtc
ctcagcttgcagcagctctttaatgaactcgtccaggaccaaggacccaatctggaccga
acgtcctcccacgtcagcggcattaaggaactggcccgacggtttgcactcacatttgga
ctggaccagatcaaaaccagagaggccgtggccacactgcacaaggatggtattgagttt
gccttcaaggtcccaaatccaaaaggaccggaatacccaccgcccaatctggcctttctg
gaagttctctgagagttctcctccaaacttctacggcaggacaagaagactgtacattcc
tacctggagaagtttatgacagagtatatgatggagagaagagaggatgtgtggctacca
ctcatcgcttacagaaactcactgttgacaggtggagatgatgaccgactgtctgtcaca
accggaagcacaaccagcaaagccagcacagtccgaagcaaaagaggccgaccggcacag
caaaaaagacggccagacgaggagagcatggaaggctcgtgggtgatgcgcaacgacagc
ctccagacaccagggggtctccacaccccacagctaacatccactgtcctcagagaaaac
cccagacaggcagcagaacacatcccagaccaggactcatcggaaccaggctcagaacca
gactacatgcacaatcctccgatgcagatgtcttggttggatcagcagcagaagatggat
gaggtgaaccgaaaggagaggggcgggatgaactacatgaagtcacgcagcggtggagtg
agacagcaggtgcgaggtctcatggaagatgatgccgagcccatctttgaagatgtgatg
atgtcatcacgtggccagctggaggacatgaacgaggacttcgaggacaccatggtgata
gatctgccaccatcgagaaacaggagagaaagagcagaactcagaccagacttttttgac
tctacagccataatggaagatgattctggatttggaatgcagatgttttga
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