Triplophysa rosa: 130547205
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Entry
130547205 CDS
T09216
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
tros
Triplophysa rosa
Pathway
tros03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130547205 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tros03032
]
130547205 (pola1)
Enzymes [BR:
tros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
130547205 (pola1)
DNA replication proteins [BR:
tros03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
130547205 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
130547205
NCBI-ProteinID:
XP_057178944
LinkDB
All DBs
Position
LG23:complement(17803972..17850183)
Genome browser
AA seq
1472 aa
AA seq
DB search
MAPVSNSGKDTDGGDYDASDTCGIASSRSRREKKEKVGRKSALEQLKRAKKGEKVKYEVE
DLTSVYEEVDEEQYSKLVRERQDDDWIIDDDGTGYVEDGREIFDEELDDDALEKATKGKA
GGKAGNSKKNVKKMAVSKPNSIKNMFMNSNVKKPAEKDVDLSKDDLLGDILQDLHSEKPL
VLTPPPVITLKKKKTLGSPMNPFSVKPQVPKDSPEVQKSKPRPSVTQVPPAEFSPRPAAQ
TTSGKPAATQQIKKPKKEEPKEEAVEFDEMDFDEPMEAENREVEPVNVNVEPEATPTLKV
EPKTEPKDEMLISGMVGGMGWEKMEEADPTESHVEVQVDASHLPLVEGPDGDKVFRFYWL
DAFEDQYNQPGVVYLFGKVWIESAKAYVSCCVAVKNIERTLYLLPREHKVNLATGEVTEV
PVGLMDVYQEFNSLSERFKIMKFKSKPVTKSYAFEMPDIPSQSEYLEVRYSAELPSLPSE
LKGSTFSHVFGTNTSSLEHLLLNRKICGPCWLDVKTPQLSNQPISWCKVEAIAQKCDLIS
IVKDLPPPPLVVMSISLKTVQNQKTHQNEIVSLAALIHYSFALDKAPPRPPYQTHFCVVS
KPNDCVFPYDFKDAVRKKNGIVEIAGTERALLGFFLAKMHKIDPDVLVGHDIFGFDLEVL
LQRITVCKVPHWSKIGRLRRANMPKLGGRSGFAEKSATCGRLVCDIEISAKELIRCKSYH
LTELVAQILKTERVVVPPENIRNFFSDSPHLLYLLELTWMDAKLILQIMCELNVLPLAMQ
ITNIAGNIMSRTLMGGRSERNEFLLLHAFHERNFIVPDKQFYKKPQQDPRDDDIDPGKSK
SNKVRKKAAYAGGLVLEPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVERGATNSRKK
TQEDDDNEIPELPDQSLEMGILPKEIRKLVERRRQVKQLMKQQDLNPDLYMQYDIRQKAL
KLTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKEMVQRMNLEVIYGDTDSIMIN
SNSTNLEEVFKLGNKVKSEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALMVEPQGDGKYT
TKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSRDTIVENIQKHLIEVGEKVASGSIP
LNMFEINKALTKDPQDYPDKKSLPHVHVALWINSQGGKKVKAGDTVSYVICQDGSNLPAS
QRAYALEQLQKQEGLSLDTQYYLSQQVHPVVGRICEPIEGIDAVLIATWLGLDPSHFRAH
QQQQREDEGDNFLGAPAQLTDEERYRDCEKFTFSCPDCGTENIYDNVFEGTGSSLQPSLK
SCCHVPCDASQLEHGLRISNKLQLDIRRHIRKYYNGWLLCEDQACRNRTRRLPIAFSRSG
PICPVCLRSTLRPEYSEKTLYNQLCFYRYIFDWEYAVNKVLPEEDKRMFKNGWERERKVY
KMLKAVTESTLATSGYSEVNLAKLFQAFTMLN
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgtttcaaattccggtaaagacactgacggtggagattacgatgcatcagac
acatgtggcatcgcttcctcgcgctccaggcgagagaaaaaagagaaagtggggcgcaag
tcggctttggagcagcttaaacgagccaagaaaggagaaaaggttaaatatgaggtggag
gatttgaccagcgtgtatgaagaggtggatgaagaacaatactccaaattagtgcgtgag
aggcaggatgatgattggatcattgatgacgatgggacgggttatgtggaggatggtaga
gagatctttgatgaagaattggatgatgacgctctggagaaggctacaaaaggtaaagca
ggtggaaaggcaggaaactcaaagaagaatgtaaagaaaatggccgtcagtaaacccaac
agcattaaaaacatgttcatgaacagcaatgtgaagaagccggctgagaaagatgtggat
ttgtccaaagatgatctgctgggagatattctacaggatctgcactctgagaaaccactt
gtgctcacacctccaccagtaatcaccttgaagaaaaagaaaactttgggatcccctatg
aatccattttcagttaaaccacaggtgccaaaggattcacctgaagtccagaaatcaaag
cccaggccttcagtgacacaggttcctccagctgagttttcacccagacctgctgctcaa
accacctccggtaaaccagctgccacacaacagataaagaaacccaagaaagaggagcct
aaagaagaggcagttgagttcgatgagatggattttgatgaacccatggaggcagagaac
cgggaagtggagccggtgaatgtaaatgtggagcctgaggccacacctactcttaaagtg
gaacccaaaaccgagccgaaggatgagatgttgatatctggaatggttggtggtatgggt
tgggaaaagatggaggaggccgaccccaccgaaagtcatgtggaagtgcaagtggatgcc
agtcacttacctctggtggagggacctgatggagataaggttttccgtttctactggctg
gatgcttttgaggaccagtacaaccaacctggtgtggtgtacctgtttggaaaggtgtgg
atcgaatctgcaaaagcttacgtaagctgttgcgttgctgtcaagaatattgagaggaca
ttgtatcttctgcccagagaacataaagtaaatctggcaaccggtgaggtgacagaagtt
ccagtaggattgatggatgtgtaccaggagttcaacagtctttctgagaggtttaaaatc
atgaaatttaagtccaagccagtgaccaagagctatgcctttgaaatgccagatattccc
tcacagagcgagtaccttgaagtcagatactctgctgagcttccttcattgccatctgag
ctgaaaggctcaacgttttcccatgtttttggcaccaacacctccagcttggagcacttg
ctgcttaaccggaagatctgtggaccttgctggctagatgtcaagactcctcagttgagc
aatcagcctattagctggtgtaaagtggaggccatagcgcagaagtgtgatctgatctca
attgttaaagacctgccacctcctcccctggtcgtcatgtccataagcctcaagactgtg
cagaaccaaaagactcaccagaatgagattgtttccctggctgcccttattcattatagc
tttgccctggacaaagctccaccacgaccaccttaccagacccatttctgtgtggtgagc
aaacccaacgactgtgtcttcccatatgactttaaagatgctgtcaggaaaaagaatggg
atagtagagatagcaggcacagagcgtgcactattgggcttctttttggccaagatgcac
aagattgatccagatgttttggtgggtcatgacatctttgggtttgacctggaagtgctc
ctgcagaggattaccgtgtgcaaagtgccacactggtccaagatcggcaggctaagaaga
gccaacatgccaaaactggggggtcgcagcggctttgcggagaagagtgccacttgtggg
cgcctggtgtgtgacattgagatctctgccaaagagctcatccggtgtaagagttatcac
ttgactgagctggtggcccagatcctgaagacagagagggtggtggtgcctccagaaaac
atcaggaacttctttagtgactcccctcaccttctctaccttttggagctcacctggatg
gatgccaagctgatcctgcaaatcatgtgtgagctgaatgtgctccctttggcaatgcag
atcacaaacatcgctggtaacatcatgtctcgcactttgatggggggacgttcggagagg
aatgagttcctactgctccacgctttccatgagaggaacttcattgttccagacaaacag
ttctacaagaagccacaacaagatcctagagatgatgatattgatcctggaaaaagcaag
tcgaacaaagtgaggaagaaggcagcgtatgctggaggtttggtgttggagccaaaagtt
ggtttctatgacaagtttattttgctgttggacttcaacagtttgtacccttccatcatc
caggagtttaacatctgtttcacaactgtcgagaggggtgctaccaactcgcgcaagaaa
actcaggaggatgatgataatgagattcccgagttgccagatcaaagtctggagatgggc
attcttcccaaagaaattcgaaaactggtggagcgtcgacgtcaggtcaaacagctaatg
aagcaacaggacctcaatcctgatctttacatgcagtatgatattagacagaaggccctc
aagctgacggctaacagcatgtatggatgcctgggattttccttcagtcgcttttacgcc
aagcctttggctgcactggtcactcataaaggacgagagattttgatgcacaccaaagaa
atggtgcagaggatgaatctggaggtcatatacggagatactgactccatcatgatcaac
agtaacagcaccaacctggaggaggtcttcaaactgggaaacaaggtgaaaagcgaggtg
aataaactctataagctcctggagattgacatcgatggggtatttaaatcccttctgctg
ctgaagaagaagaaatatgcggcactgatggttgagccacagggggatggcaaatacacc
accaaacaggaactcaaaggccttgacattgtgcgcagggactggtgtgacctggccaag
gagtgcggcaattacgtgattggtcagattctgtcagatcagagtcgcgacaccatcgtg
gagaacattcagaaacatctgattgaggttggagagaaggtcgccagtggcagtatccca
ctcaatatgtttgagataaataaggcactgacaaaggaccctcaggactaccccgacaag
aagagtctccctcacgttcacgttgccctctggatcaactctcagggtggcaagaaggtt
aaagccggtgacacggtgtcttatgtcatctgtcaggacggttctaacctgccagccagt
cagagggcgtacgctctggaacagctgcagaaacaggaaggtctcagcttggacacgcag
tactacctgtcccagcaggtgcaccctgtggtgggccgaatctgcgagcccatcgagggc
attgacgcagtacttattgcaacctggctagggctcgacccaagtcactttcgagcccac
cagcagcagcagagagaggacgagggagacaacttcctgggagcgccggcccagctcacc
gacgaggagcgctaccgtgattgtgagaagtttactttctcttgccctgactgcggtaca
gaaaacatctatgacaacgtctttgaagggacgggaagctccttacagcctagtttgaag
agttgctgtcacgtcccgtgtgatgccagccagttggaacatggcttacggataagcaac
aaactacaactggacattcgccgtcatatcaggaaatactacaatggttggctgctttgt
gaggatcaggcttgtcggaatcgaactcgccgactgcccattgccttctcgaggtccggc
ccgatctgccctgtctgtctcagatccacactgagaccagagtattctgagaaaaccctg
tacaaccagctgtgcttctacagatacatcttcgattgggaatacgccgtcaacaaggtc
ctgccagaggaggataaacggatgttcaagaatggctgggaaagagaaaggaaagtgtac
aaaatgctgaaggctgtaaccgagagcacccttgccaccagcggatactcggaggtcaac
ctcgccaaactcttccaggcttttacaatgctcaactga
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