Triplophysa rosa: 130547210
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Entry
130547210 CDS
T09216
Symbol
ptchd3a
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tros04990
]
130547210 (ptchd3a)
Domain-containing proteins not elsewhere classified [BR:
tros04990
]
Other domain-containing proteins
Patched domain-containing proteins
130547210 (ptchd3a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
130547210
NCBI-ProteinID:
XP_057178950
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All DBs
Position
LG23:14451310..14457639
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AA seq
1003 aa
AA seq
DB search
MELCSLMNLTVILFSYHSVLMERKEPKPRHCVEKPISICFQRFGRFVGTHPWWFFISPLF
ISAVLGSGFYFLQDREANDIEDQFTPVNGPAKLERQFVQENFPPNDSVFSNQRLYTDGVY
ASFIAVSTSSNILVDSAFQEIVTLDRKVRELNVSMGHEVLTFEELCARRYKKCIPNKILD
IYLYYGKKVEMTELTFPFFRFGSSHIFLGYSVGGVNVNSSVIKSAKALRLFYFLKDHNRS
RTDLWLNEFLRVFSYNSSLNCIKVTHSTSLSRQVEFEANTKDVIPLFSITYVIAIAFSIL
SCLRFDCVMNKVWVATFGVFSAGLAVLSSFGMMLHIGVPFVMTVANSPFLILGIGVDDMF
ILISCWQQTNVHDRVETRLANTYKEAAISITITTLTDVLAFYIGLMTPFRSVRSFCLYTS
TSILFCYIYSITFFGAFLVLNGRRENRNKHWLTCTKVPEECPAGQSKWYERCCVGGAYDP
HTGTEEVQPMNHFFKKYYGPFLTKSWTKVFVILLYCIYLIVSIYGCFQIQEGIDLRNLAA
DDSYVVKYYDDEKAYYSEYGPNIMVVIRREFPYWDETYMSDLESCIEDFKNLSFIEKDIF
TSWIKSYKYYGHHTKLDLSAENVFKDNLGTFLRFYSDFKQDVNFTNNSIHASRFFIQTVN
ISTALDEMNMLNKLRDTAQRCPVPLLVYHPAFIYHDQYAVIVSNTIQNIGVTTAVMLIIS
LLLIPNPLCSLWVTFSIASVIVGVTGFMALWDVHLDTISMIILVVCIGFSVDFSAHISYA
FVSNKKPSANEKAVEALFHLGYPILQGAVSTILEVVVLSASKNYIFRTFFKIMFLVIFFG
LIHGLTFIPVFLTFFDMCSGTPAKINSKNKAEEEVMKNSHTNNIHPKTKDGEIKELNVYD
NHTFQPSDHQVGQTQPCSAVWMITGNNGHVQDDRMCMASTVPMFRVDMQTYDVHMYTASD
DKRFKVNGHSKQGSEDQNCVLGNSNHIQDSHVPTLNCSNVDAS
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggagctctgttcattaatgaacttgactgtcattctcttctcatatcactctgtgctg
atggagcgaaaagagccaaaaccacgccactgcgtggagaagcccatctccatctgcttc
cagaggttcggccgcttcgtgggaacccatccgtggtggttcttcatctctcctctgttt
atctctgccgtgttgggcagtggattttatttcttacaggatcgcgaggccaatgacatc
gaggaccagttcacaccagtgaacggtcctgccaaactggagaggcagttcgtgcaggag
aactttcctccgaacgactcggtgttctccaaccaaagactgtacacggatggagtttac
gcatcttttattgctgtctcaacgtcctccaacatcctcgtggattctgcgtttcaggag
attgtcactttggacaggaaagtcagggaactgaatgtgtccatgggtcacgaggtgctc
acttttgaggagctttgcgcacgaaggtacaagaagtgcatacccaataagatactggat
atttatctatattacgggaaaaaggtggaaatgaccgagctcacctttccgttttttcgt
tttgggtcctcgcacattttcctgggctattctgttggtggagtgaatgttaattcttct
gttattaaaagtgccaaggcattgcgcctcttttatttcctcaaggatcacaatcgctcc
agaacagatttatggctgaatgaattcctcagggtattttcttacaattcatcgctaaac
tgcattaaggtgacccactccacatctttgtcaaggcaggtggaatttgaggcaaacaca
aaggatgttattccactcttctctatcacatatgtcattgccattgcattctccattctc
tcttgtttaaggtttgattgtgtcatgaacaaagtatgggtggcaacgtttggagttttc
tctgccggactagctgttctttcctcttttgggatgatgttacacattggagtcccattt
gtcatgacagtagctaattcacctttcttgatattggggatcggagtggacgacatgttc
atcctcatctcctgttggcagcagacgaatgtgcacgatcgagtggagacccgcctggcg
aacacatacaaagaggcggccatctcgatcaccatcaccacgctcacagatgtcctcgcc
ttctacatcggcctcatgacgcccttccgttcggttcgctccttttgcttgtacaccagc
acctccatcctgttctgctacatctacagcatcacgttctttggtgcgtttctcgttctc
aacgggaggcgcgagaaccgaaacaagcactggctgacctgcacgaaagttccagaggag
tgtcccgcgggtcagtcgaaatggtacgagcggtgttgcgtgggcggagcttacgacccc
cataccggcacagaggaggtgcaacccatgaatcacttctttaaaaagtactacggccct
ttcctgaccaaatcgtggactaaggtctttgtgattctgttgtattgcatctacttgatt
gttagcatttacggctgctttcagattcaggaggggattgaccttcgtaatttggcggcc
gacgattcttacgtagtgaagtactacgatgacgagaaagcgtactactccgaatacggc
cccaatatcatggtcgtcattcgacgagaatttccatattgggatgaaacgtacatgtca
gatctggaatcttgcatcgaagattttaagaatttatcttttatcgaaaaggatatattt
acatcttggattaaatcgtacaagtactacggccatcacaccaaactcgatctgagtgcg
gagaacgttttcaaagacaatttaggaacatttctcagattttattcggacttcaaacag
gatgtcaatttcaccaacaactccatccatgcgtctcggttcttcatacagacggtaaac
atctccacagccttggatgagatgaacatgttgaacaagctaagagacacagcacagagg
tgtccggtacccttactagtgtaccacccagcattcatctaccatgaccagtatgccgtg
atagtcagcaacaccattcagaacattggcgttacgacagccgtgatgttgatcatctct
ctcctgctcatcccaaaccctctgtgctccctttgggtgactttttcaatcgcatctgtc
atcgttggggtcactgggttcatggcattgtgggatgttcatttagacaccatctctatg
atcattcttgtcgtctgcattggtttttctgtggatttctctgctcacatatcatacgcc
ttcgtctccaataagaagcccagtgcgaatgaaaaagcagtggaagccctttttcattta
ggttaccctattttgcaaggggcggtgtcgactattcttgaggtggttgtgttgtctgcg
tcgaagaattacatcttcagaacattcttcaaaatcatgttcctggtgatcttctttgga
ctcatccacggtttgaccttcatcccagttttcctgaccttctttgacatgtgtagcggg
acaccggctaaaatcaacagtaaaaataaagcagaggaagaggtcatgaagaacagccat
accaataatattcatccaaagactaaagacggtgagattaaagagctgaacgtttatgac
aatcacacttttcaacccagcgaccatcaggttggtcaaactcaaccctgctctgccgtt
tggatgataaccggcaataatggtcacgttcaagatgatcggatgtgcatggcgagcact
gtcccgatgttcagagtggacatgcagacttatgacgttcacatgtatacagcctccgat
gataaaaggtttaaagtgaacggtcactccaaacaaggctctgaagatcagaattgtgtt
ttaggaaatagcaaccacattcaagattcacatgttcccactctgaattgttcaaacgtg
gacgcttcgtga
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