Triplophysa rosa: 130547242
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Entry
130547242 CDS
T09216
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
tros
Triplophysa rosa
Pathway
tros04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130547242 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130547242 (spata13)
Membrane trafficking [BR:
tros04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130547242 (spata13)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
PH
SH3_9
DUF1604
Motif
Other DBs
NCBI-GeneID:
130547242
NCBI-ProteinID:
XP_057179008
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All DBs
Position
LG23:18730895..18750561
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AA seq
1231 aa
AA seq
DB search
MIKAPSSGSLVSSHSNDSFKEERQMNPKPSCGDQVQPVISKPCCEENRLNRLNSQAQSVP
VIAGGQAKPYPSRVVCLFSTQTKCEDNAAPKGPAVMPQAWSGLASFRAVGSFKKLRSSVL
QGIQNRSNAMAAGQERNLSTVVNEDTNGFFVTKRNVTTNERTCTEIDKVSNGTSQSSKTS
LLDEDEDCEVEEVFQKNSHFSRSIRRAYGPGRIPLVDIVQRQPECPSTSEPITEKSALPC
KVLEAQVNVKVQSKLSKSAENLYVFKSHFRRKVTATETQNPDSSDTTILQRTTSSSSVDL
QNHGSSKRQSPMRTRGHLRNLVGSLTDLSVKSKSSQVPQSPLSQLHDEYSRRTPCVSSTG
RQPRPSPAPSNAQQGTQVNIHQHMPTLHPAPSCPAFFTSVLDDSLEPPSKTTALMSDCMH
VAKSSTDFASVCLLERYCEPMECHQNGANYHVSQTLARCSSPSQKETINSNNTECLWNSA
QRETDDSEAASSEEVLKALLKTRDENSCATQSPLLTTPTTPNSPSCAGDSSTSVVPRKRA
GRSRPRPVSDYGQLDRSKFCIPEDKEPEVMDYTSQKDYNSNGSYIENDRKENGDVCTQSQ
SRKRRPISVIGGVDLFSAPAAEQKEDAESLPSPVSRPPIPSRGVPPYRAVSARLRPCVFS
QSTPIGLDRMGRRRARRVLSDGSSNPMLDDSISEEDGSFEELTEVTPYLQPEADLFTLNQ
YINAGHAVYAEALWDHVTMEEQELAFKAGDVIRVLDVGEKDWWWGMVGDREAWFPSSFVR
VRVNQEDSSSDSVENTLEEESAPSDTYKQNTHHREQMRANVVNEIMDTERVYIKHLKDIC
EGYIRQCRKNPAMFTVAQLKTIFSNIEDIYKFQRMFLKDLEKKYNAENPHLSEIGSCFLQ
QGEGFSIYSEYCNTHPAACTELHRLMKQGKYKHFFEACRLLQQMIDISIAGFLLTPVQKI
CKYPLQLGELLKFTPQDHSDYSGVCDAHTAMKNVASLINERKRRLESIDTIAHWQVSILH
WEGDDVLTRSSELIHSGELTRMVRPGKTQQRSCFLFDHQLVFCKKDVLRRDLLHYRGRLD
SDHLELIDLPDGRHHDLGLLKNAFLLRHSENLEVLSVLCCRKNQDKQRWLQAFERERRRV
QEDQEMGMEISEAQRKQAVQNARKSKQGKMKKMNYSSHPVPPHHQPLHPLHQRHVTVPTS
IPQQQVFSLAEPKKKPVHLWYSFARSAFFKK
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgataaaggctccttcgtctggctcacttgtctcctctcatagcaatgattctttcaaa
gaggagcggcagatgaatcccaagcctagctgtggtgaccaggtccagcctgtcatatcc
aagccatgctgtgaggagaacagacttaacagactgaattctcaggcccagtccgttcct
gtgattgctggtgggcaggccaagccgtacccctctagggttgtatgtctgttttccacc
cagacaaaatgtgaggataatgctgctccaaaaggtccagctgtcatgccccaggcatgg
tctggactggctagctttcgcgccgtgggatctttcaaaaaactgcggtcttctgtgctc
caaggaatccagaacaggagcaatgctatggcagctggacaggagagaaatctttccaca
gtggtcaatgaggataccaatggtttctttgtaaccaagcgaaatgtcacaaccaacgag
aggacatgtacggaaattgataaagtgtcaaacggtacatcccaaagtagcaaaacatca
cttctggatgaagatgaagattgtgaggtggaagaagtttttcagaagaattcacatttt
tcaagaagtatccgcagggcttatggaccggggcgcatcccgttggttgacatagtgcag
agacaaccagagtgcccatctaccagtgagcccatcacggaaaagtctgctttaccttgc
aaagtccttgaagctcaagtaaatgtcaaggttcagagtaaactgagcaaaagtgcagaa
aatctctacgtcttcaagagtcattttagacgcaaagttaccgcaactgagactcaaaac
ccagatagctctgatactacaattcttcagaggaccaccagctcctcatccgttgacttg
cagaaccatggttccagtaaacggcaaagtcccatgagaacgcggggacatctgcgaaat
cttgttggcagtttaacggacctgtctgtcaaaagtaaaagctctcaagtgccacagtca
cctctaagtcagctccatgacgagtactcccgcagaacgccttgtgttagctcaacaggg
cgtcaacccagaccttcacctgcacccagcaatgcccagcagggaacgcaggtcaacatt
caccaacacatgccaactttgcaccccgctccctcctgtcctgccttctttacctccgtc
ctagatgactctttggagcctcctagcaaaacaacagccctcatgagtgactgtatgcat
gtggctaaatcttcaacagatttcgcctcagtttgtttgctggaaaggtactgtgaacct
atggagtgccatcaaaatggagcaaattaccacgtctctcaaacgctcgctcggtgttca
agccccagtcaaaaggagacgatcaatagcaataacacggagtgtttatggaattctgca
cagagagaaacggacgactcggaggctgcttcatctgaagaagttttaaaagctcttttg
aaaacaagggatgagaactcctgtgctacacaatccccactgctaaccactccaacaaca
ccaaactctccatcttgtgccggtgactcgtccacttctgtagtgcccaggaaaagggct
ggtcgctccagacctcggccagtgtctgactatggccagctggacagatcaaagttctgc
atcccagaggacaaagagcctgaggttatggactacacttcccagaaggactacaatagc
aatgggagctacattgagaatgacagaaaggagaatggtgatgtctgtactcaaagccag
agcagaaagaggcgtcccatctctgttattggaggagtggatttgttttctgccccagca
gctgagcagaaggaagatgctgaaagtttgccatcgccggtttctcgtcctccaatacct
tctcgtggagtccctccataccgggccgtatctgcccgtctgagaccctgcgtcttctcc
caaagcacacccatcggcctggatagaatgggacgacgcagagctcgcagagtgctcagt
gatggtagctctaatccaatgttggatgacagcatcagtgaagaggacggcagctttgaa
gagctgactgaagtaacgccctacctccaaccggaagccgaccttttcacactcaatcag
tacataaacgcaggccatgccgtgtatgccgaggccttgtgggaccatgtcacaatggaa
gagcaggagctggccttcaaagccggggacgtgatacgggtcctggatgttggggagaag
gattggtggtgggggatggtgggtgaccgtgaggcgtggttcccctccagctttgtgcgg
gtacgggtaaatcaggaagattccagcagtgacagtgtggagaacacactggaggaagag
tcggccccctcggacacatacaaacaaaacactcatcaccgggaacagatgagagcaaat
gtggtcaatgagataatggacacagagcgtgtttacataaagcatctcaaagatatctgt
gagggatatattcgtcagtgtaggaagaaccctgccatgttcacagttgcacagctaaag
acaatcttcagcaacatcgaggacatctacaagttccagagaatgtttctcaaggaccta
gaaaagaaatacaatgcggaaaaccctcatctgagtgaaatcggctcctgctttctacaa
cagggggaaggtttctctatatactccgagtactgtaacactcacccagcagcgtgtact
gaattacatcgtttaatgaaacaaggaaaatacaaacacttttttgaggcgtgtcgactc
ctacagcagatgattgacatctccatcgccggcttcttactcacacctgtacagaagatc
tgtaaataccctctccaactaggagagctgctaaaattcacaccacaagaccacagtgac
tattcgggggtgtgtgacgcacatacagcaatgaaaaatgtggcgagtctgataaatgag
aggaaaagacgtcttgagagcatcgacaccatcgctcactggcaagtgtccattctacac
tgggagggagatgatgtgttaacacggagctctgagctcatccactcaggcgagctgaca
cggatggtacggcccggtaagacgcagcaacgcagctgcttcctgtttgaccaccagctg
gtgttctgtaagaaagacgtcctacggagagacctgctacattaccgtggtcgtctagac
tcagatcacctcgaactaattgacctgcccgatgggcggcaccacgatctaggcttactg
aagaacgccttcctcctgcggcattcagagaacctggaggtgttaagtgtactttgctgc
agaaagaaccaggataagcagcgatggttgcaagcgtttgagcgagagcgcagacgtgta
caggaggaccaagagatggggatggagattagcgaggctcagaggaagcaagcagttcag
aacgctaggaaatctaaacaaggcaaaatgaaaaaaatgaattattccagtcaccctgtg
cctccccaccatcagccgctacatcctctccatcagcgacacgtgaccgtgccaaccagc
atcccgcagcagcaggtcttctctttagcagagccgaagaaaaaacctgttcacctgtgg
tactcgttcgcacgcagcgccttcttcaaaaaatga
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