Triplophysa rosa: 130547257
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Entry
130547257 CDS
T09216
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
tros
Triplophysa rosa
Pathway
tros03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130547257 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130547257 (nup58)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130547257 (nup58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
GCP_N_terminal
Nup49_C
PSY3
FapA
Tox-ODYAM1
Siah-Interact_N
Motif
Other DBs
NCBI-GeneID:
130547257
NCBI-ProteinID:
XP_057179026
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All DBs
Position
LG23:17378244..17387218
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AA seq
645 aa
AA seq
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MSFNFGTANVTLGAAGTNTGGGFGFGAATSTPATAGTGGFTSGGFGTATSTPAATNTTST
LGFGSSLFAQKPATGLNFNSSASGAATPSTAVTLGSLSTSTAANTGFTLGFGKPAASAAP
FSLTTTTSAPAGTGLTLGSILTSTAPQPSNSGFAFNLGGPDTTSSAPPSGFSFGSGLFSN
SAATGLGQSTLGLGQSTLGLGQSTLGLGQSTLGLGQSTLGLGQSTLGLGQSTLGLGQSTL
GLGLTLGGLVSASVPASSAPVPSLGLGGVDFSTSSDKNTDKSSSTRPEDSKALKDENLPG
PICQDVDHFQKFVKEQKQVHEEISRMSSKAILKVQEDINTLRQLLSVCASGLQRNSLSID
KLKMETSQELKNADIAFRTQKTPPGLQHENTAPSDYFRTLVEQFEVQLQQYRQQIEELEN
HLTTQSSGSHITPQDLSLAMQKLYQTFVALAAQLQGVHENFKTLKHRYLSYRRVFLDDST
DVFESRRTASKKWQSSPHVITGPAPFGSVPNAAAVAMAATLTQQQQPAPGPQAPLGGSFG
TSFSSGIGTSMGSSSLGAFGSGPGFGGVATGGLSFGFSSSKPSGGSLSAGFGTSNTSGFN
FSNPGINASAGLTFGVSNTQTPGFGAGGPLLQLKKPPAGNKRGKR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaactttggtacagctaacgttactctcggcgccgccggtaccaacaccggc
gggggctttggatttggtgccgcgaccagtaccccagctacagcaggcacgggtggattc
acgtccggaggttttggcacagcgacctccacaccggccgccaccaataccacctccaca
ctaggatttgggtccagtttatttgcacagaaaccagcaactgggttgaattttaactca
tccgcctcaggagctgccacaccatctactgccgttactttagggagtctttcaacctcg
actgctgctaacactgggttcaccctgggctttggaaagccagcagcctccgctgcacct
ttctcactgaccaccacgacctccgcacctgcaggcacaggcctgactctgggatccatc
ctgacctccacagcccctcagcccagcaactctggctttgcctttaacttgggaggcccg
gacactacttcctctgctcctccctctgggttttcctttggttctggtctcttctccaac
tctgcagcaacaggtttgggacagtctactcttggtttgggacagtctactcttggtttg
ggacagtctactcttggtttgggacagtctactcttggtctgggacagtctactcttggt
ctgggacagtctactcttggtctgggacagtctactcttggtctgggacagtctactctt
ggtctgggtttgactctgggtggtttggtctctgcttctgttcctgccagctctgctcct
gtgcccagtcttggattgggtggtgttgactttagcacttcttctgacaaaaatactgac
aagtcatcaagcaccagaccagaggacagtaaagctcttaaagatgaaaacttaccaggt
ccgatatgtcaagatgtggatcattttcagaaatttgtcaaagagcagaagcaagtgcat
gaggagatcagccggatgtcctctaaagccattctcaaagtgcaggaggacatcaatacc
ctccgacagcttctctctgtctgtgccagcggcctgcagagaaactcactatccatagac
aaattaaagatggaaacttctcaggaattgaagaatgccgacatcgcgttccgcacccag
aagaccccacctggactccaacatgagaatacagccccgtctgattatttccgtactcta
gtggaacagtttgaagtgcagttacagcagtaccgtcagcagatcgaggaactggagaat
catctgaccacccagagcagcggctcgcacatcacccctcaagatttgtccctggccatg
cagaaactctaccagacgtttgttgctcttgctgcacagctgcagggggttcatgagaat
tttaagaccttaaagcatcggtacctgagctacagacgagtcttcctcgacgactccacc
gacgtgttcgagtcgagacgcacagccagtaagaagtggcagagctctcctcacgtcatc
acaggccccgcccccttcggcagcgttcccaacgcagcggccgttgccatggctgccact
ctcactcagcagcagcagccggctccaggaccacaagcgcccctggggggcagttttggc
acttccttttcatcgggtattggcacaagcatgggctcatccagcctcggagcatttggt
agcggccctgggtttgggggtgtggcaacaggaggtttgtcgttcgggttttcctctagc
aagccatctggagggagcctgagcgcagggtttggaacttctaacacctcaggctttaac
ttcagtaacccaggcatcaatgcatcggctgggctgaccttcggtgtgtccaacacacag
actccagggttcggggcgggaggacccctgttacagctcaaaaagccccctgcgggtaac
aagaggggcaagagataa
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