Triplophysa rosa: 130547268
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Entry
130547268 CDS
T09216
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
tros
Triplophysa rosa
Pathway
tros03271
Virion - Rotavirus
tros04145
Phagosome
tros04510
Focal adhesion
tros04512
ECM-receptor interaction
tros04514
Cell adhesion molecules
tros04530
Tight junction
tros04810
Regulation of actin cytoskeleton
tros04820
Cytoskeleton in muscle cells
tros05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
130547268 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130547268 (itgb1a)
04514 Cell adhesion molecules
130547268 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130547268 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130547268 (itgb1a)
04530 Tight junction
130547268 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130547268 (itgb1a)
04810 Regulation of actin cytoskeleton
130547268 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130547268 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130547268 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130547268 (itgb1a)
04515 Cell adhesion molecules [BR:
tros04515
]
130547268 (itgb1a)
04090 CD molecules [BR:
tros04090
]
130547268 (itgb1a)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130547268 (itgb1a)
Exosome [BR:
tros04147
]
Exosomal proteins
Proteins found in most exosomes
130547268 (itgb1a)
Cell adhesion molecules [BR:
tros04515
]
Integrins
Integrin beta subunits
130547268 (itgb1a)
CD molecules [BR:
tros04090
]
Proteins
130547268 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
130547268
NCBI-ProteinID:
XP_057179051
LinkDB
All DBs
Position
LG23:complement(8162183..8189396)
Genome browser
AA seq
802 aa
AA seq
DB search
MDLKLLFISTLLGIICYSSAQQEGNECIKANALSCGECIQVGAKCGWCTDTDFLKQGEPT
SARCDELESLLKRGCAVSKVENPRGSQRTLNNKPVTNRKKGAEKLRPEDITQIQPQKLSL
KLRSGEPQNIKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMLEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQQFNTLVGQQQI
SGNLDSPEGGFDAIMQVAVCGEHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAITEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIIDAYNSLSSEVILENSKLPEGVTITYQSHCKNGIVNDGENGRRCSNISIG
DEVSFSINITAQGCPRQGKSETIKIKPLGFTEEVEIVLYFICECECHKQGIKNSDLCHNG
NGTFECGACRCNKGRVGRQCECRKDEVSTEDLDKNCRKDNGTDICSNNGECVCGTCECKK
RDNPEERYSGKYCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDTSTCL
ASNKQICNGRGTCECGTCRCTDPKFQGPTCEICPTCPGVCTEHKECVQCRAFGTGEKKDT
CERDCSYFNLIKVKDRDKLPQPVQAFPLMHCKERDANDCWFYYTYAVNNNTEKEVHVVED
LECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTTEN
PIYKSPINKFKNPNYGRKAVAL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaagctactcttcatatcaacattattaggcattatttgttacagcagtgca
cagcaagagggcaatgagtgcatcaaagccaatgcattatcctgtggagagtgcatacaa
gtgggggctaaatgtggatggtgcactgatacagactttcttaaacagggagaacccaca
tcggcccgctgtgatgagctggagtcactcctgaagagaggctgtgcggtctccaaagtc
gagaaccctcgtgggagtcaaaggaccctcaataacaagccagtgaccaatcgcaagaaa
ggagccgaaaaactccgacccgaggacatcacacagatccagccccagaaactcagcttg
aaactcagatctggtgagcctcagaatattaaactgaagttcaagagggctgaggactat
cccattgacctgtactaccttatggacctgtcctactctatgaaggatgatttggagaat
gtcaaaaacctggggactagtttgatgctggagatgtccaaaattacctcagatttcaga
attggttttggctcttttgtggagaagaccgtcatgccttatattagcaccactccagcc
aaacttcttaacccttgtactggggaccaaaactgcaccagtcccttcagctacaaaaat
gtgctgaaactcaccagcaatgggcagcagttcaatactctggtgggccagcaacagata
tctggtaatcttgactcacctgagggaggatttgatgctatcatgcaggtggctgtttgt
ggggagcacataggctggagaaacgtcacccgtttgttggtgttctcaacggacgcaggt
ttccactttgccggagatggaaaactcggtggaatcgttcttcccaacgatgggaaatgc
cacctggaaaacaacatgtacacaatgagccattattacgattatccctccatcgcccac
ttggttcagaaactgagcgaaaacaacattcagaccatatttgcaatcacggaagagttt
cagcctgtttacaaggaacttaaaaacctcattcccaagtctgcagtgggcacgctgtcg
gcaaactccagcaatgttatcaatcttattattgatgcctacaattctctctcctcagag
gtcattctggaaaacagtaaacttcctgaaggcgtgaccatcacctatcaatcacactgc
aaaaatggaatagtgaatgatggtgaaaatggaaggagatgctccaacatttccattgga
gatgaggtatccttcagcattaatatcacagctcagggctgccccagacaaggcaagtca
gaaaccattaagatcaaacccttgggctttactgaggaggtcgagattgtgctctacttt
atctgcgagtgtgagtgccacaaacaaggcattaaaaacagcgacttgtgccataacgga
aatggaacatttgagtgtggagcctgcaggtgcaataagggacgtgttggccgacagtgt
gaatgtcgtaaggacgaggtgtccaccgaggacctggacaagaactgccgcaaggacaat
ggcacagacatctgcagcaacaatggcgagtgcgtgtgcggcacctgcgagtgcaagaag
agggacaatcccgaggaacgctacagcggcaaatactgcgagtgcgacaacttcaactgc
gaccgttccaacaataaactctgcggaggacatggccgttgtgagtgcagagtgtgcata
tgcgacgctaactacactggaagtgcctgtgactgttctctggacacatctacatgttta
gcctcaaacaagcagatctgtaacggcagaggaacctgcgagtgtgggacctgcaggtgc
acggaccctaaattccaggggcccacctgtgagatctgccccacctgtcctggagtctgc
actgagcataaggagtgtgtgcagtgtcgggcattcggcacaggagagaagaaagacact
tgcgagagagactgtagttactttaacctcatcaaggtgaaggacagagacaagcttcct
cagcccgtccaggccttcccccttatgcactgcaaggagagagacgccaatgattgctgg
ttctactacacctacgccgttaacaacaacactgagaaggaggtccatgtggtggaggat
ttagagtgtccagctggtcctgacatcatccccattgtggccggtgtggtcgcaggcatc
gttctgattggtttagccctgctgctgatctggaagctgctcatgatcattcacgaccga
cgcgagtttgccaaatttgagaaagagaagatgaacgccaagtgggacacgacagagaat
ccaatttacaagagtcctattaataaattcaagaatccaaactatggtcgtaaagctgtt
gctctttaa
DBGET
integrated database retrieval system
