Triplophysa rosa: 130547273
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Entry
130547273 CDS
T09216
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tros01001
]
130547273 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130547273 (prpf4bb)
Enzymes [BR:
tros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
130547273 (prpf4bb)
Protein kinases [BR:
tros01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
130547273 (prpf4bb)
Spliceosome [BR:
tros03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130547273 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
Pkinase_fungal
CSTF_C
Motif
Other DBs
NCBI-GeneID:
130547273
NCBI-ProteinID:
XP_057179058
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All DBs
Position
LG23:9774809..9787243
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AA seq
1004 aa
AA seq
DB search
MADMEVDLRSERLDNGPEDLESPEKSGNEDENGEISGEDEDEEGEEEAEVNGEKQDSGSK
HHSSGGKHKKKKHKHRSKHKKHKHASEENKERKRKHRHKHKKHRRKEETTSSPTGAINRR
AGDDSLTLGNATVDDRALLEDLEKQRALIKAELDSQLMEGKVQSGMGLILQGYNTGSEED
GEGSRARNGQRGSGPRTRSPRDQSSKRGKSRRDSTDASSRSRDKAGRDGKLDRMTKSAKE
AVKERSKSKERKRSQSRDKSKERGRKSHSPSSRRRSSAERKPDQKGRSDRRSPEKREQAG
RRSGSRGRKSRSRERRSRSKDARPGRSEIDKEKRPGKSPSKDTSSGKENRSPHLRRAVSP
QRRRSSSPRHRERQSNQHPSGSADRNSKLSHSPSRNRSPARRARSRSIDRRRDSPFRKRP
RMDGVGRSRETSPSRRRMSRSPLRRRSISPRRQSRLSPRRRSPLRRRSLERDRFGRARPR
RSTSRDRDRRRRRRSRDEDKFKGSLSEGMKADRDDSSEEVIEDFDAEEEDEEALIEQRRQ
QRLAIVQKYRAANEDSNMGSMASEPSSPQSSTRSRSPSPDDILERVAADVKEYERENLNT
FEASIKAKHNLIAQEKEGTNTKKPSAPDMFTESDDMFAADFDSARLRAAGIGKDFKENPN
LRDNWTDSEGYYRVNIGEILDKRYEVYGYTGQGVFSNVVRARDTARAGQEVAVKIIRNNE
LMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGK
DVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVAD
NEITPYLVSRFYRAPEIIIGKPYDYAIDMWSVGCTLYELYTGKILFPGSSNNHMVKLAMD
VKGKMPNKMIRKGQFKDQHFDQNLNFLFIEVDKVTEREKVTVMSTINPTKDLLADMVGGQ
RLPEDQRKKVMQLKDLLDGTLMLDPAKRITINQALQHPFIQEKI
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatggaagtggatttacggagcgagaggctggataacgggcctgaggattta
gaaagtcctgagaagagtgggaatgaggatgagaacggtgaaatatctggggaggatgaa
gatgaggaaggtgaggaggaagcagaggtgaacggtgaaaagcaagacagcggctccaag
catcacagcagcggaggcaaacacaagaaaaagaaacacaagcaccgcagcaagcacaaa
aaacacaaacatgcgtctgaggaaaataaggaacgtaaacgcaaacacagacacaaacat
aagaagcacagacgcaaagaggagaccacctcctcgcccaccggggccatcaacaggaga
gccggggacgactctcttactcttggcaatgccaccgttgatgaccgggctcttctggaa
gacctggagaaacagagagcgctgatcaaagccgagctggacagccagctgatggagggt
aaggttcagtcaggcatgggtttgattttacagggttacaataccggctccgaggaggac
ggagaggggtcaagggcacgaaacgggcaaagaggaagcgggcctcgaacccgctcgccg
agggaccagagtagcaagaggggtaaatccaggcgggactcgacggatgccagcagccgc
tctcgggacaaagcagggagggacggtaagcttgaccgaatgaccaaaagtgctaaagag
gcagtaaaggagcgtagcaagtccaaagagagaaaacgctcccagagcagggacaaatcc
aaggaacgtgggaggaaatcccactccccgtccagcaggcggcgctcttctgcagagaga
aaacctgatcagaaggggcgatcagaccgccgttcccctgagaagagggagcaagctggg
aggagatcgggctcgcgagggcgcaagagccggtcgcgagaacgacggtcgcgctccaaa
gatgctcggcctgggcgttcagagatcgacaaagaaaagaggccgggaaagtctccatct
aaagacacgtcttctggaaaagagaatcgatcgcctcatctaaggcgagctgtgagccct
cagcggcggcgcagttcttcccctcgccacagggagcggcaatccaaccaacacccctcg
ggttcagccgatcggaactctaaactgagccactcaccatctaggaatagatcacctgcc
aggagggcacgaagtcgctcgattgatcgcaggagagattctcccttcaggaaacgtcct
cgaatggatggagtcgggaggtcacgggagacgagtccatcccgacgcagaatgagccgc
tcaccactcaggcgtagatctatatcaccacgacgacagtctcgcctctcccccagaagg
cgatcacctttaagacgaaggtctcttgaaagggatcggttcggccgtgccagaccgcga
cgatccacctccagagatcgtgataggaggaggaggcggcggagccgagatgaagataag
ttcaaaggcagcctatcagagggaatgaaagcagaccgtgacgactcatctgaagaagtt
attgaggattttgatgctgaagaggaggatgaagaggctctcattgaacagcgacgacaa
caacggctcgctattgtacagaaatacagagcggcaaatgaggacagtaatatgggctca
atggcgtcggagccgagcagtcctcagagcagcactcgcagtcgatcgccctcacccgat
gacatcctggagcgcgtggcagctgacgtgaaggagtacgagcgggagaacttgaacacc
tttgaggccagcatcaaggccaagcacaacctcatcgctcaggagaaagaaggaaccaac
acaaagaagccctcagcacctgatatgttcacagagtctgatgacatgtttgccgcagac
ttcgatagtgctaggttaagggctgcgggcatcggtaaagactttaaagagaaccccaac
ctcagggataactggacagattcggagggctactaccgtgtgaacattggtgagatcctg
gacaagcgttatgaagtgtacgggtacaccggtcagggtgtgttcagtaatgtggtccga
gcgagagacaccgcaagggctggccaggaggtggcagtcaagatcatccgcaacaatgag
ctcatgcagaaaacgggactgaaggagcttgagtttctgaagaagctaaacgacgcagat
ccagatgataaatttcactgtttgcgtctcttcagacacttttaccacaaacagcatctc
tgcctggtcttcgaacctctcagtatgaatttgcgggaagtgctgaagaaatacggtaaa
gatgttgggttgcacatcaaggcggtgcgatcctacagtcagcagctcttcctggctctc
aaactactgaaacgctgtaacatccttcatgccgacatcaaaccagacaacattctggtt
aacgaatccaagactattcttaaactctgtgattttggctcagcgtcccacgtcgcagac
aatgaaattacaccttacttagtcagcagattctacagagcacctgaaatcattattggt
aagccgtatgattatgcgattgatatgtggtcggtgggctgtaccctgtatgagctgtac
acggggaagatcctgttcccagggtcatccaataaccacatggtgaaactggccatggat
gtcaagggcaagatgcccaacaagatgatccgaaaaggccagtttaaagaccaacatttt
gaccagaacttgaacttcttgttcatagaagtagacaaagtgactgaacgggagaaggta
actgtgatgagcaccattaaccccactaaagacttgctcgctgatatggtcggtggccag
aggctgcctgaggaccagcggaagaaagtcatgcagctcaaggatctgttggatggaact
ctgatgctggacccggcgaaacgcatcaccatcaaccaggccctgcagcatcccttcatt
caggagaagatatga
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