Triplophysa rosa: 130547354
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Entry
130547354 CDS
T09216
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
tros
Triplophysa rosa
Pathway
tros04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130547354 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130547354 (arfgef1)
Membrane trafficking [BR:
tros04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
130547354 (arfgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
CheX
Motif
Other DBs
NCBI-GeneID:
130547354
NCBI-ProteinID:
XP_057179219
LinkDB
All DBs
Position
LG23:complement(13003659..13059503)
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AA seq
1865 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAESEKLSPPPGDNKS
GSSTLPPIKSKTSFVEADQYFLPFELACQSKCPRIVITALDCLQKLIAYGHLTGSAPDNT
IPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKINWSLASRKRDRQLQEAKQMER
ERHRQHSPISQQEPESPGQRHVDTPPKGLPAEANGGPGHQGGKAEQGSPPYESPETENGS
DFCPAENEQTEADQATAAAQSEAEHATEVTEEEESPNYEEKAHEIVQSILQEVVNTVAGD
VKESREGEAESVEGIPNSLEEEGGLGSDNENVHVNGIPGTPISASFTPSLPDDRMSVSSN
DTQESSTTGSAPGAKFSHILQKDAFLVFRSLCKLSMKPISDGPPDPKSHELRSKVLSLQL
LLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHL
KMQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQGVVDIYVNYDCDLNAANIF
ERLVNDLSKIAQGRGGHELGTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTS
LGQEKSLDQESNESKHPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQK
EIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSIQVGEFLGDNDRIN
KEVMYAYVDQMDFQGKDFVPALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFA
SADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAG
KKISMKETKELPLKSNKQNVASEKQRKLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATH
LEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQ
ALARFTLLTASSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIG
TGVKARYISGTVRGKEGFITSTKEQTSDEYLGLGGNVDRKQIASIQESIGETSSQSVVVA
VDRIFTGSIRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQW
SRIWEVIGDHFNRVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIM
KKNRSPTIRDMVVRCIAQMVNSQAGNIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHI
VTNVFEKHFPATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSDRPQAFKDY
TSDDMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTYEKHWW
QDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLSDVLLDNILSQ
LYWCVQQDNEQLARSGTNCLENVVILNGEKFNPETWDKTCNCMLDIFKTTIPHTLLTWRP
AGTEGDHVTHPDSDKQLDSISQKSVDIQTRSDDQQSVSSMEKALADNRRQSQYSVTLEGQ
EQRLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQRDAFDADVHVDTQDQG
MYRYLTSEQLFKLLDCLLESHRFAKAFNSSNEQRTALWKAGFKGKSKPNLLKQETSSLAC
GLRILFRMYTDQSRQDAWEEVQRRLLNVCSDALAYFLTLTSESHREAWTNLLLLFLTKVL
KISDDRFKAHASRYYPLLCEIMQFDLIPELRAVLRKFFLRIGLVFQITQCSEPDQASGTQ
TSHDA
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaggcaaaaagacgaaaaacatgtttttaaccagagctttagaaaagatcttg
gccgacaaggaggtgaaaaaggctcatcattcgcagctgcgcaaagcctgtgaggtggca
ctagaggaaatcaaggcggaatcagagaaattaagcccaccacctggtgataacaagtct
ggctccagcactttaccaccaatcaaatccaagaccagcttcgtcgaagcagaccagtac
ttcctgccgtttgagttggcctgtcagtccaaatgtcctcgcattgtcatcactgcctta
gactgtttacagaaacttatagcatatggtcatctgacgggcagcgctccagacaacacc
atcccgggaaagaagctcatcgacaggatcatagaaacgatatgcggctgtttccagggg
ccgcagacggatgaaggagtccagttgcaaattataaaggccttgcttacggccgtgacc
tcccagcacatcgagatccacgaaggcacggtgctacaggctgtgagaacgtgttacaac
atctatctggccagtaaaaacctcatcaaccagaccacagccaaagcaaccctcacccaa
atgctgaatgtgattttcgcccggatggaaaaccaagcacttacaaatcacaagatcaat
tggtctttggcatccagaaagcgtgatcgtcagctccaggaagccaagcagatggagaga
gagagacacaggcagcattctcccatcagccagcaagagccagaatctcctgggcagcgg
cacgttgacacaccgcccaaaggccttccagcggaggccaacgggggtccgggtcaccag
ggcggcaaggctgagcaaggttcccctccttacgaaagcccagagacagaaaacggcagt
gatttttgtccggcggagaacgagcagaccgaggcggaccaggccactgcggctgcacaa
agtgaagctgagcacgctacagaagtcactgaggaagaggaaagcccgaactatgaagag
aaagctcatgagattgtacagagcattttacaggaagtcgtaaacacagtagctggagat
gttaaggaaagcagagagggcgaggctgagtcagttgagggcattccaaactcgctggaa
gaggagggagggttgggtagcgacaacgaaaatgttcacgtcaacggcatccctggaacg
cccatctctgcgagcttcactccgtccctgcccgacgacagaatgtctgtctcctccaat
gacactcaggaatcttctaccaccgggtcagcgccaggtgcaaagttctctcatatcctc
cagaaggacgccttcctggttttccgttcactttgcaagctgtcgatgaagccgatttca
gacggtccccctgatccaaaatcccacgagctacggtccaaggtcctgtcgctccagctc
ctcctctccatccttcagaatgccgggcctatattcaagaccaatgagatgttcatcaac
gccattaagcagtacttgtgcgtggcactgtccaaaaacggcgtttcctccgtgcctgaa
gtgttcgagctctctctgtctatcttcctcaccctcctgtccaacttcaagacgcatctc
aagatgcaaatcgaggtctttttcaaagagattttcctgtatattctagagacgtccaca
agctcatacgaccacaaatggatggtcattcaaacgcttactagaatatgtgctgatgca
cagggtgtggtagatatctatgtgaattatgattgtgacctgaatgctgctaatatattc
gagaggctggtgaatgacctctcaaagattgcacaaggacgaggaggccatgaattgggt
acaaccccgcttcaggagctgaccttaagaaagaaaggcctggagtgtctggtgtccatc
ctcaagtgtatggtcgagtggagcaaagaccagtatgtcaaccccaattctcagaccagt
ctcggccaagagaagtctttagaccaggagagcaatgagtcgaagcatccagaaaccatt
aaccgctatggaagcataaactccctagactccaccgcctcatcgggcatcgggagctac
agcacccagatgtcaggaacagacaaccctgaacagtttgaggttctcaaacaacagaaa
gagatcattgagcagggcattgacctgttcaacaaaaaaccaaagaggggcattcagtac
ctgcaggagcagggaatgctgggaaccacgcctgaagatatcgctcagtttttacatcaa
gaggagagacttgactctatccaagtaggagagtttctcggtgacaacgatcgcatcaat
aaagaagtcatgtatgcctacgtggaccaaatggacttccagggcaaggactttgtgccg
gctctgcgcatgtttctcgagggctttcgtctgcctggagaagcccagaaaatcgatcgg
ctgatggagaagtttgctgctagatatttagaatgcaaccaaggacaaactctgttcgca
agtgccgacacggcttacgtcctggcgtattcaatcatcatgttgactacagatcttcac
agtccacaggtgaaaaataaaatgacgaaagagcaatacatcaagatgaaccgtggcatc
aatgacagtaaagatttacccgaggagtatctgtctgccatttacgacgagatcgcaggg
aagaaaatatccatgaaggagacaaaagaattacctcttaagtcaaataagcaaaatgtg
gccagtgagaagcagaggaaacttctgtataacgttgagatggagcagatggcaaagaca
gccaaggctctgatggaggctgtgagtcacgttcaggcccccttcaccagcgccacccac
cttgaacacgtcagacccatgtttaagctggcttggacgccattcctggctgcgtttagt
gtgggtcttcaggactgtgatgatactgaagtggcttctctgtgtctggagggaatccgc
tgtgctatcaggatcgcttgcatcttcagcattcagttagagcgagatgcgtacgtacag
gccctggcccgctttacgctgctcacggccagctcgggcatcaccgagatgaagcagaag
aacatcgacaccatcaagactcttattacagtggcccacactgatggaaattatctagga
aactcctggcatgagatcctgaagtgcatcagtcagctggagttggctcagctcatcggg
acgggtgtaaaggcgcggtacatttcaggaactgtgcgggggaaagaaggcttcatcact
agtactaaggaacagacgtctgacgaatatctgggcttgggaggaaatgttgaccgtaaa
cagatcgcaagcatacaggaatctatcggggagaccagctcgcaaagtgtggtagtcgct
gtggacaggatctttacaggctccatcagacttgatggaaacgctattgttgactttgtg
cggtggctatgtgccgtatcaatggacgaactggcctcccctacacaccctcgaatgttc
agtctgcagaagattgtcgagatatcctactacaacatgggtcgcatcaggctacagtgg
tccagaatatgggaagtcataggagatcattttaacagggttggttgtaatcccaatgag
gatgttgctatttttgccgtggattcgctcaggcagctttccatgaaattcctagagaag
ggagagttggccaacttccgattccagaaggatttcctgaggccatttgagcacatcatg
aaaaagaacagatctcccaccatcagagacatggtggtccgctgtatagctcagatggtc
aactctcaggctgggaatattagatcagggtggaagaatattttctcggtgtttcatctg
gccgcctctgaccaggatgagagtatagtggagctggccttccagacaaccggacacatt
gtcacgaatgtatttgagaagcatttccctgccaccatcgactccttccaagacgctgtc
aaatgtttgtctgagtttgcctgcaacgcttccttccccgacaccagcatggaggccatt
cgtctgatccgccactgcgccaaatacgtctccgaccgacctcaggcgtttaaagactat
accagtgatgatatgaacgtcgcaccggaggaccgggtctgggtgagaggatggttccct
attctctttgagctgtcgtgcatcataaacaggtgtaagctggacgtgcggaccaggggt
ctgacggtgatgtttgaggtgatgaagacttacggccacacctatgagaaacactggtgg
caggatctgttccgcatcgtctttaggatcttcgacaacatgaagcttccggagcaacag
actgagaaagccgagtggatgaccaccacctgtaatcacgcactttacgccatctgcgat
gtcttcacacagtactttgaatctctcagtgatgttctgttagataatattctgtctcag
ctctactggtgtgtgcagcaagataatgaacagttggcccgatcaggaactaactgtctt
gaaaacgtggtcattcttaacggtgagaagtttaaccctgaaacctgggacaagacctgc
aactgcatgctcgacatcttcaaaaccaccatcccacacacgctgttgacgtggaggccg
gctggtactgagggagatcatgtgactcatccagactcagataaacagctggattccatt
tcccagaagtcagtggatattcagactcgctcggatgaccagcagtccgtgagcagtatg
gagaaagcgctggctgacaaccgcaggcagagtcagtacagcgtgactttagaaggccag
gaacagcgtctgtttgctgctctgctcataaagtgtgtggtccagctggagctcattcag
accatagacaacattgtgttctttcctgcgaccagtaagaaggaggatgctgagaacttt
gctgcagcacagagagatgcttttgatgccgacgtgcacgtggatactcaggatcaagga
atgtatcgctacctgacctcagaacagctctttaaactgcttgactgcttgctggagtca
catcgcttcgcaaaggccttcaactctagtaatgaacagaggacagcgctgtggaaggct
ggtttcaaagggaagtcgaagcctaatctgttgaaacaagagaccagcagcctggcgtgc
ggcctgcgcatccttttccgcatgtacacggaccagagcaggcaggatgcatgggaggag
gtgcagagaagactgctcaatgtgtgcagtgacgctttggcgtacttcctgaccctgaca
tcagagagccaccgtgaggcctggactaacctgctgctgctcttccttaccaaagtgctc
aagatcagtgatgacagattcaaggctcatgcgtcccgatactaccctctgctgtgtgaa
attatgcagtttgatctgatcccagaactgcgggccgtgctgcgcaagttcttcctgcgc
atcggattggttttccagatcacacagtgttcggaaccagaccaggcctctggcacccag
acttcccatgatgcctag
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integrated database retrieval system
